Uses of Class
edu.cmu.tetrad.search.test.IndependenceResult
Packages that use IndependenceResult
Package
Description
Contains classes for searching for (mostly structural) causal models given data.
Contains classes for running conditional independence tests for various sorts of data.
Contains some classes that aren't ready for prime time.
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Uses of IndependenceResult in edu.cmu.tetrad.search
Methods in edu.cmu.tetrad.search that return IndependenceResultModifier and TypeMethodDescriptionCompositeIndependenceTest.checkIndependence
(Node x, Node y, Set<Node> z) checkIndependence.default IndependenceResult
IndependenceTest.checkIndependence
(Node x, Node y, Node... z) Checks the independence fact in question and returns and independence result.IndependenceTest.checkIndependence
(Node x, Node y, Set<Node> z) checkIndependence.IndTestIod.checkIndependence
(Node x, Node y, Set<Node> z) Checks the independence between two nodes given a set of nodes.Methods in edu.cmu.tetrad.search that return types with arguments of type IndependenceResultModifier and TypeMethodDescriptionMarkovCheck.getResults
(boolean indep) After the generateResults method has been called, this method returns the results for the Markov or dependency check, depending on the value of the indep parameter.Method parameters in edu.cmu.tetrad.search with type arguments of type IndependenceResultModifier and TypeMethodDescriptiondouble
MarkovCheck.getAndersonDarlingA2
(List<IndependenceResult> visiblePairs) Calculates the Anderson-Darling A2 value for a list of independence results.double
MarkovCheck.getAndersonDarlingPValue
(List<IndependenceResult> visiblePairs) Calculates the Anderson-Darling p-value for a given list of independence results.double
MarkovCheck.getBinomialPValue
(List<IndependenceResult> visiblePairs) Calculates the binomial p-value based on the list of visible pairs.double
MarkovCheck.getFractionDependent
(List<IndependenceResult> results) Calculates the fraction of dependent results.double
MarkovCheck.getKsPValue
(List<IndependenceResult> visiblePairs) Calculates the Kolmogorov-Smirnov (KS) p-value for a list of independence test results.MarkovCheck.getPValues
(List<IndependenceResult> results) Returns the list of p-values for the given list of results. -
Uses of IndependenceResult in edu.cmu.tetrad.search.test
Methods in edu.cmu.tetrad.search.test that return IndependenceResultModifier and TypeMethodDescriptionIndTestChiSquare.checkIndependence
(Node x, Node y, Set<Node> _z) Determines whether variable x is independent of variable y given a list of conditioning varNames z.IndTestConditionalCorrelation.checkIndependence
(Node x, Node y, Set<Node> z) Checks the independence of x _||_ y | zIndTestConditionalGaussianLrt.checkIndependence
(Node x, Node y, Set<Node> _z) Returns and independence result that states whether x _||_y | z and what the p-value of the test is.IndTestDegenerateGaussianLrt.checkIndependence
(Node x, Node y, Set<Node> _z) Returns an independence result specifying whether x _||_ y | Z and what its p-values are.IndTestFisherZ.checkIndependence
(Node x, Node y, Set<Node> z) Determines whether variable x _||_ y | z given a list of conditioning variables z.IndTestFisherZConcatenateResiduals.checkIndependence
(Node x, Node y, Set<Node> _z) Determines whether x _||_ y | z.IndTestFisherZFisherPValue.checkIndependence
(Node x, Node y, Set<Node> _z) Checks for independence between two nodes given a set of conditioning nodes.IndTestGSquare.checkIndependence
(Node x, Node y, Set<Node> _z) Determines whether variable x is independent of variable y given a list of conditioning varNames z.IndTestHsic.checkIndependence
(Node y, Node x, Set<Node> _z) Determines whether variable x is independent of variable y given a list of conditioning variables z.IndTestIndependenceFacts.checkIndependence
(Node x, Node y, Set<Node> __z) Checks independence by looking up facts in the list of facts supplied in the constructor.IndTestMulti.checkIndependence
(Node x, Node y, Set<Node> z) Determines whether variable x is independent of variable y given a list of conditioning variables z.IndTestMvpLrt.checkIndependence
(Node x, Node y, Set<Node> _z) Determines whether two nodes are independent given a set of conditioning nodes.IndTestProbabilistic.checkIndependence
(Node x, Node y, Node... z) Checks the independence fact in question and returns and independence result.IndTestProbabilistic.checkIndependence
(Node x, Node y, Set<Node> _z) checkIndependence.IndTestRegression.checkIndependence
(Node xVar, Node yVar, Set<Node> zList) Checks the independence between two variables, given a set of conditioning variables.IndTestTrekSep.checkIndependence
(Node x, Node y, Set<Node> z) Determines independence between variables x and y, given the set of variables z.Kci.checkIndependence
(Node x, Node y, Set<Node> z) Checks the independence between two nodes given a set of conditioning variables.MsepTest.checkIndependence
(Node x, Node y, Set<Node> z) Checks the independence between two nodes with respect to a set of conditioning nodes.ScoreIndTest.checkIndependence
(Node x, Node y, Set<Node> z) Checks the independence between two nodes given a set of additional nodes.static IndependenceResult
IndependenceResult.serializableInstance()
Generates a simple exemplar of this class to test serialization.Methods in edu.cmu.tetrad.search.test with parameters of type IndependenceResultModifier and TypeMethodDescriptiondouble
Kci.getScore
(IndependenceResult result) Returns alpha - p. -
Uses of IndependenceResult in edu.cmu.tetrad.search.work_in_progress
Methods in edu.cmu.tetrad.search.work_in_progress that return IndependenceResultModifier and TypeMethodDescriptionIndTestCramerT.checkIndependence
(Node x, Node y, Set<Node> _z) Checks the independence between two nodes given a set of conditioning nodes.IndTestFisherZPercentIndependent.checkIndependence
(Node x, Node y, Set<Node> _z) Checks the independence between two nodes x and y given a set of conditioning nodes z.IndTestFisherZRecursive.checkIndependence
(Node x, Node y, Set<Node> z) checkIndependence.IndTestMixedMultipleTTest.checkIndependence
(Node x, Node y, Set<Node> z) Checks for independence between two nodes.IndTestMnlrLr.checkIndependence
(Node x, Node y, Set<Node> _z) Checks the independence between two nodes given a set of conditioning nodes.IndTestMultinomialLogisticRegression.checkIndependence
(Node x, Node y, Set<Node> z) Checks for independence between two nodes, given a set of conditioning nodes.IndTestPositiveCorr.checkIndependence
(Node x0, Node y0, Set<Node> _z0) Checks the independence between two nodes, given a set of conditioning nodes.IndTestSepsetDci.checkIndependence
(Node x, Node y, Set<Node> z) Checks the independence between two nodes, given a set of conditioning nodes.ProbabilisticMapIndependence.checkIndependence
(Node x, Node y, Node... z) Checks the independence fact in question and returns and independence result.ProbabilisticMapIndependence.checkIndependence
(Node x, Node y, Set<Node> _z) checkIndependence. -
Uses of IndependenceResult in edu.pitt.csb.mgm
Methods in edu.pitt.csb.mgm that return IndependenceResultModifier and TypeMethodDescriptionIndTestMultinomialLogisticRegressionWald.checkIndependence
(Node x, Node y, Set<Node> z) Determines the independence between two variables given a set of conditioning variables.