Uses of Interface
edu.cmu.tetrad.algcomparison.utils.TakesIndependenceWrapper

Packages that use TakesIndependenceWrapper

Package	Description
edu.cmu.tetrad.algcomparison.algorithm.continuous.dag
edu.cmu.tetrad.algcomparison.algorithm.multi
edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag
edu.cmu.tetrad.algcomparison.algorithm.oracle.pag

Uses of TakesIndependenceWrapper in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag

Classes in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag that implement TakesIndependenceWrapper

Modifier and Type	Class	Description
class	FaskOrig	Deprecated.

Uses of TakesIndependenceWrapper in edu.cmu.tetrad.algcomparison.algorithm.multi

Classes in edu.cmu.tetrad.algcomparison.algorithm.multi that implement TakesIndependenceWrapper

Modifier and Type	Class	Description
class	FaskConcatenated	Wraps the IMaGES algorithm for continuous variables.
class	FciIod	Runs FCI on multiple datasets using the IOD pooled dataset independence test.
class	Ion	Runs the ION (Integration of Overlapping Networks) algorithm on multiple datasets whose variable sets may overlap only partially.

Uses of TakesIndependenceWrapper in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag

Classes in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag that implement TakesIndependenceWrapper

Modifier and Type	Class	Description
class	Cdnod	CD-NOD wrapper for algcomparison.
class	CdnodBoss	Algcomparison wrapper for the CD-NOD-BOSS search (CdnodBoss): a BOSS backbone with constraint-based collider orientation applied only to unshielded triples that BOSS leaves fully undirected, followed by Meek closure.
class	CdnodPag	CD-NOD wrapper for algcomparison.
class	Cpc	Conservative PC (CPC).
class	Cstar	Cstar class.
class	Fas	Fast Adjacency Search (FAS)--i.e., the PC adjacency step, which is used in many algorithms.
class	Grasp	GRaSP (Greedy Relaxations of Sparsest Permutation)
class	Pc	Peter/Clark algorithm (PC).
class	PcAr	Peter/Clark algorithm with adjacency-rescue (PcAR): PC augmented with detection, and optionally repair, of cancelled unfaithful-triangle edges.
class	PcMax	PC-Max.
class	PcMb	PC.
class	Pcmci	PCMCI wrapper for algcomparison.

Uses of TakesIndependenceWrapper in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag

Classes in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag that implement TakesIndependenceWrapper

Modifier and Type	Class	Description
class	Bfci	Adjusts FGES-FCI to use a permutation algorithm (such as BOSS-Tuck) to do the initial steps of finding adjacencies and unshielded colliders.
class	BfciBryan	BFCI-Bryan: BOSS followed by the from-scratch, sepset-map-as-state formulation of the gated StarFCI extra-edge-removal step, with sepset RE-SELECTION (a gate-rejected separating set does not retire the pair; the next separating set is tried) and NO saturating step.
class	BfciBryanScore	BFCI-Bryan-Score: BFCI-Bryan (sepset re-selection under the legality gate) with a scoring step: a legal candidate is committed only if the RICF Gaussian BIC of its MAG strictly improves on the committed model's, following Bryan Andrews's "BFCI-Bryan with scoring" pseudocode.
class	BfciC	Adjusts FGES-FCI to use a permutation algorithm (such as BOSS-Tuck) to do the initial steps of finding adjacencies and unshielded colliders.
class	BfciD	Adjusts FGES-FCI to use a permutation algorithm (such as BOSS-Tuck) to do the initial steps of finding adjacencies and unshielded colliders.
class	BfciScoreCheck	/ Hidden from the interface on 2026-10-21 (no @Algorithm annotation): kept only so that saved sessions
class	BossCcd	BOSS-CCD (Cyclic Causal Discovery with a BOSS adjacency superstructure).
class	BossFci	BOSS-FCI, the former name of BFCI.
class	Ccd	CCD (Cyclic Causal Discovery)
class	Cfci	CFCI (Conservative FCI).
class	Cpw	Implements the CPW (Cyclic Pairwise) algorithm for causal discovery from continuous, causally sufficient observational data.
class	Dm	Algorithm-comparison wrapper for the Murray-Watters/Glymour style Detect-Mimic search, DM.
class	DmFcit	DM-FCIT, removed in Tetrad 8.0.0.
class	DmPc	DM-PC, removed in Tetrad 8.0.0.
class	Fci	The Fast Causal Inference (FCI) algorithm.
class	FciCyclicPw	FCI-CPW: Run FCI with internally constructed PW-forbidden knowledge, then orient edges using a pairwise left-right rule on standardized data in cases that are safe under no-selection-bias cyclic semantics: Tail–tail (—) edges Orient per pairwise rule. Tail–circle (—o) edges If pairwise prefers x→y, set x→y (symmetrically, if prefers y→x, set y→x). Circle–circle (o–o) edges If pairwise prefers x→y, set x o→y (symmetrically for y→x).
class	FciMax	FCI-Max.
class	Fcit	This class represents the FCI Targeted Testing (FCIT) algorithm, which is variant of the *-FCI algorithm for learning causal structures from observational data using the BOSS algorithm as an initial CPDAG and using all score-based steps afterward.
class	FcitMagMarkov	This class represents the FCI Targeted Testing (FCIT) algorithm, which is variant of the *-FCI algorithm for learning causal structures from observational data using the BOSS algorithm as an initial CPDAG and using all score-based steps afterward.
class	FcitMarkov	This class represents the FCI Targeted Testing (FCIT) algorithm, which is variant of the *-FCI algorithm for learning causal structures from observational data using the BOSS algorithm as an initial CPDAG and using all score-based steps afterward.
class	FcitSl	This class represents the FCI Targeted Testing (FCIT) algorithm, which is variant of the *-FCI algorithm for learning causal structures from observational data using the BOSS algorithm as an initial CPDAG and using all score-based steps afterward.
class	FcitSlScoreCheck	FCIT-SL-Score-Check: the FCIT-SL algorithm with a MAG BIC SCORE CHECK applied to every candidate the search adjudicates.
class	FcitZm	This class represents the FCI Targeted Testing (FCIT) algorithm, which is variant of the *-FCI algorithm for learning causal structures from observational data using the BOSS algorithm as an initial CPDAG and using all score-based steps afterward.
class	Gfci	The Fges-FCI class represents the Greedy Fast Causal Inference algorithm, adjusted as in *-FCI.
class	GfciOld	The GFCI class represents the Greedy Fast Causal Inference algorithm, adjusted as in *-FCI.
class	GraspFci	GRaSP-FCI, an implentatation of *-FCI using GRaSP.
class	Icd	The Iterative Causal Discovery (ICD) algorithm.
class	IsGfci	IS-GFCI (Instance-Specific GFCI) wrapper for the algcomparison interface.
class	Rfci	RFCI.
class	SpFci	Adjusts GFCI to use a permutation algorithm (in this case SP) to do the initial steps of finding adjacencies and unshielded colliders.