Package edu.cmu.tetrad.util

Class Params

java.lang.Object

edu.cmu.tetrad.util.Params

public final class Params
extends Object

May 7, 2019 2:53:27 PM

Version:

$Id: $Id

Author:

Kevin V. Bui (kvb2@pitt.edu)

Field Summary

Fields

Modifier and Type	Field	Description
static final String	ADD_ORIGINAL_DATASET	Constant ADD_ORIGINAL_DATASET="addOriginalDataset"
static final String	ALLOW_INTERNAL_RANDOMNESS	Constant ALLOW_INTERNAL_RANDOMNESS="allowInternalRandomness"
static final String	ALPHA	Constant ALPHA="alpha"
static final String	APPLY_R1	Constant APPLY_R1="applyR1"
static final String	AVG_DEGREE	Constant AVG_DEGREE="avgDegree"
static final String	BASIS_SCALE	Constant BASIS_TYPE="basisType"
static final String	BASIS_TYPE	Constant BASIS_TYPE="basisType"
static final String	BOOTSTRAPPING_NUM_THREADS	Constant BOOTSTRAPPING_NUM_THEADS="bootstrappingNumThreads"
static final String	BOSS_ALG	Constant BOSS_ALG="bossAlg"
static final String	CACHE_SCORES	Constant CACHE_SCORES="cacheScores"
static final String	CCI_SCORE_ALPHA	Constant CCI_SCORE_ALPHA="cciScoreAlpha"
static String	CELL_TABLE_TYPE	Constant CELL_COUNT_TYPE="cellCountType"
static final String	CG_EXACT	Constant CG_EXACT="cgExact"
static final String	CHECK_TYPE	Constant CHECK_TYPE="checkType"
static final String	COEF_HIGH	Constant COEF_HIGH="coefHigh"
static final String	COEF_LOW	Constant COEF_LOW="coefLow"
static final String	COEF_SYMMETRIC	Constant COEF_SYMMETRIC="coefSymmetric"
static final String	COLLIDER_DISCOVERY_RULE	Constant COLLIDER_DISCOVERY_RULE="colliderDiscoveryRule"
static final String	COMPARE_GRAPH_ALGCOMP	Constant USE_PSEUDOINVERSE_FOR_LATENT="usePseudoinverseForLatent"
static final String	COMPLETE_RULE_SET_USED	Constant COMPLETE_RULE_SET_USED="completeRuleSetUsed"
static final String	CONCURRENT_FAS	Constant CONCURRENT_FAS="concurrentFAS"
static final String	CONFLICT_RULE	Constant CONFLICT_RULE="conflictRule"
static final String	CONNECTED	Constant CONNECTED="connected"
static final String	COV_HIGH	Constant COV_HIGH="covHigh"
static final String	COV_LOW	Constant COV_LOW="covLow"
static final String	COV_SYMMETRIC	Constant COV_SYMMETRIC="covSymmetric"
static final String	CPDAG	Constant CPDAG="cpdag"
static final String	CSTAR_CPDAG_ALGORITHM	Constant CSTAR_CPDAG_ALGORITHM="cstarCpdagAlgorithm"
static final String	CUTOFF_CONSTRAIN_SEARCH	Constant CUTOFF_CONSTRAIN_SEARCH="cutoffConstrainSearch"
static final String	CUTOFF_DATA_SEARCH	Constant CUTOFF_DATA_SEARCH="cutoffDataSearch"
static final String	CUTOFF_IND_TEST	Constant CUTOFF_IND_TEST="cutoffIndTest"
static final String	DATA_TYPE	Constant DATA_TYPE="dataType"
static final String	DEPTH	Constant DEPTH="depth"
static final String	DETERMINISM_THRESHOLD	Constant DETERMINISM_THRESHOLD="determinismThreshold"
static final String	DIFFERENT_GRAPHS	Constant DIFFERENT_GRAPHS="differentGraphs"
static final String	DISCRETIZE	Constant DISCRETIZE="discretize"
static final String	DO_COLLIDER_ORIENTATION	Constant DO_COLLIDER_ORIENTATION="doColliderOrientation"
static final String	DO_DDP_EDGE_REMOVAL_STEP	Constant DO_DDP_EDGE_REMOVAL_STEP="doDdpEdgeRemovalStep"
static final String	EBIC_GAMMA	Constant EBIC_GAMMA="ebicGamma"
static final String	ENSURE_MARKOV	Constant ENSURE_MARKOV="ensureMarkov"
static final String	ERRORS_NORMAL	Constant ERRORS_NORMAL="errorsNormal"
static String	EXTRA_EDGE_REMOVAL_STEP	Constant EXTRA_EDGE_REMOVAL_STEP="extraEdgeRemovalStep"
static final String	FAITHFULNESS_ASSUMED	Constant FAITHFULNESS_ASSUMED="faithfulnessAssumed"
static final String	FAS_RULE	Constant FAS_RULE="fasRule"
static final String	FASK_ADJACENCY_METHOD	Constant FASK_ADJACENCY_METHOD="faskAdjacencyMethod"
static final String	FASK_DELTA	Constant FASK_DELTA="faskDelta"
static final String	FASK_LEFT_RIGHT_RULE	Constant FASK_LEFT_RIGHT_RULE="faskLeftRightRule"
static final String	FASK_NONEMPIRICAL	Constant FASK_NONEMPIRICAL="faskNonempirical"
static final String	FAST_ICA_A	Constant FAST_ICA_A="fastIcaA"
static final String	FAST_ICA_MAX_ITER	Constant FAST_ICA_MAX_ITER="fastIcaMaxIter"
static final String	FAST_ICA_TOLERANCE	Constant FAST_ICA_TOLERANCE="fastIcaTolerance"
static final String	FILE_OUT_PATH	Constant FILE_OUT_PATH="fileOutPath"
static final String	FISHER_EPSILON	Constant FISHER_EPSILON="fisherEpsilon"
static final String	GENERAL_SEM_ERROR_TEMPLATE	Constant GENERAL_SEM_ERROR_TEMPLATE="generalSemErrorTemplate"
static final String	GENERAL_SEM_FUNCTION_TEMPLATE_LATENT	Constant GENERAL_SEM_FUNCTION_TEMPLATE_LATENT="generalSemFunctionTemplateLatent"
static final String	GENERAL_SEM_FUNCTION_TEMPLATE_MEASURED	Constant GENERAL_SEM_FUNCTION_TEMPLATE_MEASURED="generalSemFunctionTemplateMeasured"
static final String	GENERAL_SEM_PARAMETER_TEMPLATE	Constant GENERAL_SEM_PARAMETER_TEMPLATE="generalSemParameterTemplate"
static final String	GRASP_ALG	Constant GRASP_ALG="graspAlg"
static final String	GRASP_BREAK_AFTER_IMPROVEMENT	Constant GRASP_BREAK_AFTER_IMPROVEMENT="graspBreakAFterImprovement"
static final String	GRASP_CHECK_COVERING	Constant GRASP_CHECK_COVERING="graspCheckCovering"
static final String	GRASP_DEPTH	Constant GRASP_DEPTH="graspDepth"
static final String	GRASP_FORWARD_TUCK_ONLY	Constant GRASP_FORWARD_TUCK_ONLY="graspForwardTuckOnly"
static final String	GRASP_NONSINGULAR_DEPTH	Constant GRASP_NONSINGULAR_DEPTH="graspNonSingularDepth"
static final String	GRASP_ORDERED_ALG	Constant GRASP_ORDERED_ALG="graspOrderedAlg"
static final String	GRASP_SINGULAR_DEPTH	Constant GRASP_SINGULAR_DEPTH="graspSingularDepth"
static final String	GRASP_TOLERANCE_DEPTH	Constant GRASP_TOLERANCE_DEPTH="graspToleranceDepth"
static final String	GRASP_USE_RASKUTTI_UHLER	Constant GRASP_USE_RASKUTTI_UHLER="graspUseRaskuttiUhler"
static final String	GRASP_USE_SCORE	Constant GRASP_USE_SCORE="graspUseScore"
static final String	GRASP_USE_VP_SCORING	Constant GRASP_USE_VP_SCORING="graspUseVpScoring"
static final String	GUARANTEE_ACYCLIC	Constant GUARANTEE_ACYCLIC="guaranteeAcyclic"
static final String	GUARANTEE_CPDAG	Constant GUARANTEE_CPDAG="guaranteeCpdag"
static final String	GUARANTEE_IID	Constant GUARANTEE_IID="guaranteeIid"
static final String	GUARANTEE_PAG	Constant GUARANTEE_PAG="guaranteePag"
static final String	IA	Constant IA="ia"
static final String	IMAGES_META_ALG	Constant IMAGES_META_ALG="imagesMetaAlg"
static final String	INCLUDE_NEGATIVE_COEFS	Constant INCLUDE_NEGATIVE_COEFS="includeNegativeCoefs"
static final String	INCLUDE_NEGATIVE_SKEWS_FOR_BETA	Constant INCLUDE_NEGATIVE_SKEWS_FOR_BETA="includeNegativeSkewsForBeta"
static final String	INCLUDE_POSITIVE_COEFS	Constant INCLUDE_POSITIVE_COEFS="includePositiveCoefs"
static final String	INCLUDE_POSITIVE_SKEWS_FOR_BETA	Constant INCLUDE_POSITIVE_SKEWS_FOR_BETA="includePositiveSkewsForBeta"
static final String	INCLUDE_STRUCTURE_MODEL	Constant INCLUDE_STRUCTURE_MODEL="include_structure_model"
static final String	INTERVAL_BETWEEN_RECORDINGS	Constant INTERVAL_BETWEEN_RECORDINGS="intervalBetweenRecordings"
static final String	INTERVAL_BETWEEN_SHOCKS	Constant INTERVAL_BETWEEN_SHOCKS="intervalBetweenShocks"
static final String	IPEN	Constant IPEN="ipen"
static final String	IS	Constant IS="is"
static final String	ITR	Constant ITR="itr"
static final String	KCI_ALPHA	Constant KCI_ALPHA="kciAlpha"
static final String	KCI_CUTOFF	Constant KCI_CUTOFF="kciCutoff"
static final String	KCI_EPSILON	Constant KCI_EPSILON="kciEpsilon"
static final String	KCI_NUM_BOOTSTRAPS	Constant KCI_NUM_BOOTSTRAPS="kciNumBootstraps"
static final String	KCI_USE_APPROXIMATION	Constant KCI_USE_APPROXIMATION="kciUseApproximation"
static final String	KERNEL_REGRESSION_SAMPLE_SIZE	Constant KERNEL_REGRESSION_SAMPLE_SIZE="kernelRegressionSampleSize"
static final String	KERNEL_TYPE	Constant KERNEL_TYPE="kernelType"
static final String	KERNEL_WIDTH	Constant KERNEL_WIDTH="kernelWidth"
static final String	LAMBDA1	Constant LAMBDA1="lambda1"
static final String	LATENT_MEASURED_IMPURE_PARENTS	Constant LATENT_MEASURED_IMPURE_PARENTS="latentMeasuredImpureParents"
static final String	LOWER_BOUND	Constant LOWER_BOUND="lowerBound"
static String	LV_LITE_STARTS_WITH	Constant LV_LITE_STARTS_WITGH="LvLiteStartsWith"
static final String	MAX_BLOCKING_PATH_LENGTH	Constant MAX_BLOCKING_PATH_LENGTH="maxBlockingPathLength"
static final String	MAX_CATEGORIES	Constant MAX_CATEGORIES="maxCategories"
static final String	MAX_DEGREE	Constant MAX_DEGREE="maxDegree"
static final String	MAX_DISCRIMINATING_PATH_LENGTH	Constant MAX_PATH_LENGTH="maxPathLength"
static final String	MAX_DISTINCT_VALUES_DISCRETE	Constant MAX_DISTINCT_VALUES_DISCRETE="maxDistinctValuesDiscrete"
static final String	MAX_INDEGREE	Constant MAX_INDEGREE="maxIndegree"
static final String	MAX_ITERATIONS	Constant MAX_ITERATIONS="maxIterations"
static final String	MAX_OUTDEGREE	Constant MAX_OUTDEGREE="maxOutdegree"
static final String	MAX_SCORE_DROP	Constant MAX_SCORE_DROP="maxScoreDrop"
static final String	MAX_SEPSET_SIZE	Constant MAX_SEPSET_SIZE="maxSepsetSize"
static final String	MAXIT	Constant MAXIT="maxit"
static final String	MB	Constant MB="mb"
static final String	MEAN_HIGH	Constant MEAN_HIGH="meanHigh"
static final String	MEAN_LOW	Constant MEAN_LOW="meanLow"
static final String	MEASURED_MEASURED_IMPURE_ASSOCIATIONS	Constant MEASURED_MEASURED_IMPURE_ASSOCIATIONS="measuredMeasuredImpureAssociations"
static final String	MEASURED_MEASURED_IMPURE_PARENTS	Constant MEASURED_MEASURED_IMPURE_PARENTS="measuredMeasuredImpureParents"
static final String	MEASUREMENT_MODEL_DEGREE	Constant MEASUREMENT_MODEL_DEGREE="measurementModelDegree"
static final String	MEASUREMENT_VARIANCE	Constant MEASUREMENT_VARIANCE="measurementVariance"
static final String	MGM_PARAM1	Constant MGM_PARAM1="mgmParam1"
static final String	MGM_PARAM2	Constant MGM_PARAM2="mgmParam2"
static final String	MGM_PARAM3	Constant MGM_PARAM3="mgmParam3"
static final String	MIN_CATEGORIES	Constant MIN_CATEGORIES="minCategories"
static String	MIN_COUNT_PER_CELL	Constant MIN_COUNT_PER_CELL="minCountPerCell"
static final String	MIN_SAMPLE_SIZE_PER_CELL	Constant COMPARE_GRAPH_ALGCOMP="compareGraphAlgcomp"
static final String	NO_RANDOMLY_DETERMINED_INDEPENDENCE	Constant NO_RANDOMLY_DETERMINED_INDEPENDENCE="noRandomlyDeterminedIndependence"
static final String	NUM_BASIS_FUNCTIONS	Constant NUM_BASIS_FUNCTIONS="numBasisFunctions"
static final String	NUM_BSC_BOOTSTRAP_SAMPLES	Constant NUM_BSC_BOOTSTRAP_SAMPLES="numBscBootstrapSamples"
static final String	NUM_CATEGORIES	Constant NUM_CATEGORIES="numCategories"
static final String	NUM_CATEGORIES_TO_DISCRETIZE	Constant NUM_CATEGORIES_TO_DISCRETIZE="numCategoriesToDiscretize"
static final String	NUM_LAGS	Constant NUM_LAGS="numLags"
static final String	NUM_LATENTS	Constant NUM_LATENTS="numLatents"
static final String	NUM_MEASURES	Constant NUM_MEASURES="numMeasures"
static final String	NUM_RANDOMIZED_SEARCH_MODELS	Constant NUM_RANDOMIZED_SEARCH_MODELS="numRandomizedSearchModels"
static final String	NUM_ROUNDS	Constant NUM_ROUNDS="numRounds"
static final String	NUM_RUNS	Constant NUM_RUNS="numRuns"
static final String	NUM_STARTS	Constant NUM_STARTS="numStarts"
static final String	NUM_STRUCTURAL_EDGES	Constant NUM_STRUCTURAL_EDGES="numStructuralEdges"
static final String	NUM_STRUCTURAL_NODES	Constant NUM_STRUCTURAL_NODES="numStructuralNodes"
static final String	NUM_SUBSAMPLES	Constant NUM_SUBSAMPLES="numSubsamples"
static final String	NUM_THREADS	Constant NUM_THREADS="numThreads"
static final String	NUMBER_OF_EXPANSIONS	Constant NUMBER_OF_EXPANSIONS="numberOfExpansions"
static final String	NUMBER_RESAMPLING	Constant NUMBER_RESAMPLING="numberResampling"
static final String	ORIENT_TOWARD_DCONNECTIONS	Constant ORIENT_TOWARD_DCONNECTIONS="orientTowardDConnections"
static final String	ORIENT_VISIBLE_FEEDBACK_LOOPS	Constant ORIENT_VISIBLE_FEEDBACK_LOOPS="orientVisibleFeedbackLoops"
static final String	ORIENTATION_ALPHA	Constant ORIENTATION_ALPHA="orientationAlpha"
static final String	OUTPUT_CPDAG	Constant OUTPUT_CPDAG="outputCpdag"
static final String	OUTPUT_RBD	Constant OUTPUT_RBD="outputRBD"
static final String	PARALLELIZED	Constant PARALLELIZED="parallelized"
static String	PC_HEURISTIC	Constant PC_HEURISTIC="pcHeuristic"
static final String	PENALTY_DISCOUNT	Constant PENALTY_DISCOUNT="penaltyDiscount"
static final String	PENALTY_DISCOUNT_ZS	Constant PENALTY_DISCOUNT_ZS="penaltyDiscountZs"
static final String	PERCENT_DISCRETE	Constant PERCENT_DISCRETE="percentDiscrete"
static final String	PERCENT_RESAMPLE_SIZE	Constant PERCENT_RESAMPLE_SIZE="percentResampleSize"
static final String	POISSON_LAMBDA	Constant POISSON_LAMBDA="poissonLambda"
static final String	POLYNOMIAL_CONSTANT	Constant POLYNOMIAL_CONSTANT="polynomialConstant"
static final String	POLYNOMIAL_DEGREE	Constant POLYNOMIAL_DEGREE="polynomialDegree"
static final String	POSSIBLE_MSEP_DONE	Constant POSSIBLE_MSEP_DONE="possibleMsepDone"
static final String	PRECOMPUTE_COVARIANCES	Constant PRECOMPUTE_COVARIANCES="precomputeCovariances"
static final String	PRIOR_EQUIVALENT_SAMPLE_SIZE	Constant PRIOR_EQUIVALENT_SAMPLE_SIZE="priorEquivalentSampleSize"
static final String	PROB_CYCLE	Constant PROB_CYCLE="probCycle"
static final String	PROB_REMOVE_COLUMN	Constant PROB_REMOVE_COLUMN="probRemoveColumn"
static final String	PROB_TWO_CYCLE	Constant PROB_TWO_CYCLE="probTwoCycle"
static final String	PROBABILITY_OF_EDGE	Constant PROBABILITY_OF_EDGE="probabilityOfEdge"
static final String	RANDOM_SELECTION_SIZE	Constant RANDOM_SELECTION_SIZE="randomSelectionSize"
static final String	RANDOMIZE_COLUMNS	Constant RANDOMIZE_COLUMNS="randomizeColumns"
static final String	RCIT_NUM_FEATURES	Constant RCIT_NUM_FEATURES="rcitNumFeatures"
static final String	REMOVE_ALMOST_CYCLES	Constant REMOVE_ALMOST_CYCLES="removeAlmostCycles"
static final String	REMOVE_EFFECT_NODES	Constant REMOVE_EFFECT_NODES="removeEffectNodes"
static final String	RESAMPLING_ENSEMBLE	Constant RESAMPLING_ENSEMBLE="resamplingEnsemble"
static final String	RESAMPLING_WITH_REPLACEMENT	Constant RESAMPLING_WITH_REPLACEMENT="resamplingWithReplacement"
static final String	SAMPLE_SIZE	Constant SAMPLE_SIZE="sampleSize"
static final String	SAMPLE_STYLE	Constant SAMPLE_STYLE="sampleStyle"
static final String	SAVE_BOOTSTRAP_GRAPHS	Constant SAVE_BOOTSTRAP_GRAPHS="saveBootstrapGraphs"
static final String	SAVE_LATENT_VARS	Constant SAVE_LATENT_VARS="saveLatentVars"
static final String	SCALE_FREE_ALPHA	Constant SCALE_FREE_ALPHA="scaleFreeAlpha"
static final String	SCALE_FREE_BETA	Constant SCALE_FREE_BETA="scaleFreeBeta"
static final String	SCALE_FREE_DELTA_IN	Constant SCALE_FREE_DELTA_IN="scaleFreeDeltaIn"
static final String	SCALE_FREE_DELTA_OUT	Constant SCALE_FREE_DELTA_OUT="scaleFreeDeltaOut"
static final String	SCALING_FACTOR	Constant BANDWIDTH_ADJUSTMENT="scalingFactor"
static final String	SEED	Constant SEED="seed"
static final String	SELECTION_MIN_EFFECT	Constant SELECTION_MIN_EFFECT="selectionMinEffect"
static final String	SELF_LOOP_COEF	Constant SELF_LOOP_COEF="selfLoopCoef"
static final String	SEM_BIC_RULE	Constant SEM_BIC_RULE="semBicRule"
static final String	SEM_BIC_STRUCTURE_PRIOR	Constant SEM_BIC_STRUCTURE_PRIOR="semBicStructurePrior"
static final String	SEM_GIC_RULE	Constant SEM_GIC_RULE="semGicRule"
static final String	SEPSET_FINDER_METHOD	Constant SEPSET_FINDER_METHOD="sepsetFinderMethod"
static final String	SIGNIFICANCE_CHECKED	Constant SIGNIFICANCE_CHECKED="significanceChecked"
static final String	SIMULATION_ERROR_TYPE	Constant SIMULATION_ERROR_TYPE="simulationErrorType"
static final String	SIMULATION_PARAM1	Constant SIMULATION_PARAM1="simulationParam1"
static final String	SIMULATION_PARAM2	Constant SIMULATION_PARAM2="simulationParam2"
static final String	SKEW_EDGE_THRESHOLD	Constant SKEW_EDGE_THRESHOLD="skewEdgeThreshold"
static final String	SKIP_NUM_RECORDS	Constant SKIP_NUM_RECORDS="skipNumRecords"
static final String	STABLE_FAS	Constant STABLE_FAS="stableFAS"
static final String	STANDARDIZE	Constant STANDARDIZE="standardize"
static final String	STRUCTURE_PRIOR	Constant STRUCTURE_PRIOR="structurePrior"
static final String	SYMMETRIC_FIRST_STEP	Constant SYMMETRIC_FIRST_STEP="symmetricFirstStep"
static final String	TARGET_NAME	Constant TARGET_NAME="targetName"
static final String	TARGETS	Constant TARGETS="targets"
static final String	TEST_TIMEOUT	Constant TEST_TIMEOUT="testTimeout"
static final String	THR	Constant THR="thr"
static final String	THRESHOLD_B	Constant THRESHOLD_B="thresholdBHat"
static final String	THRESHOLD_FOR_NUM_EIGENVALUES	Constant THRESHOLD_FOR_NUM_EIGENVALUES="thresholdForNumEigenvalues"
static final String	THRESHOLD_NO_RANDOM_CONSTRAIN_SEARCH	Constant THRESHOLD_NO_RANDOM_CONSTRAIN_SEARCH="thresholdNoRandomConstrainSearch"
static final String	THRESHOLD_NO_RANDOM_DATA_SEARCH	Constant THRESHOLD_NO_RANDOM_DATA_SEARCH="thresholdNoRandomDataSearch"
static final String	THRESHOLD_W	Constant THRESHOLD_SPINE="thresholdSpine"
static final String	TIME_LAG	Constant TIME_LAG="timeLag"
static final String	TIMEOUT	Constant TIMEOUT="timeout"
static final String	TOP_BRACKET	Constant TOP_BRACKET="topBracket"
static final String	TRIMMING_STYLE	Constant TRIMMING_STYLE="trimmingStyle"
static final String	TRUNCATION_LIMIT	Constant TRUNCATION_LIMIT="truncationLimit"
static final String	TWO_CYCLE_ALPHA	Constant TWO_CYCLE_ALPHA="twoCycleAlpha"
static final String	TWO_CYCLE_SCREENING_THRESHOLD	Constant TWO_CYCLE_SCREENING_THRESHOLD="twoCycleScreeningThreshold"
static final String	UPPER_BOUND	Constant UPPER_BOUND="upperBound"
static final String	USE_BES	Constant USE_BES="useBes"
static final String	USE_CORR_DIFF_ADJACENCIES	Constant USE_CORR_DIFF_ADJACENCIES="useCorrDiffAdjacencies"
static final String	USE_DATA_ORDER	Constant USE_DATA_ORDER="useDataOrder"
static final String	USE_FAS_ADJACENCIES	Constant USE_FAS_ADJACENCIES="useFasAdjacencies"
static final String	USE_GAP	Constant USE_GAP="useGap"
static final String	USE_MAX_P_HEURISTIC	Constant USE_MAX_P_HEURISTIC="useMaxPHeuristic"
static final String	USE_MAX_P_ORIENTATION_HEURISTIC	Constant USE_MAX_P_ORIENTATION_HEURISTIC="useMaxPOrientationHeuristic"
static final String	USE_PSEUDOINVERSE	Constant USE_PSEUDOINVERSE="usePseudoinverse"
static final String	USE_SKEW_ADJACENCIES	Constant USE_SKEW_ADJACENCIES="useSkewAdjacencies"
static final String	USE_WISHART	Constant USE_WISHART="useWishart"
static final String	VAR_HIGH	Constant VAR_HIGH="varHigh"
static final String	VAR_LOW	Constant VAR_LOW="varLow"
static final String	VERBOSE	Constant VERBOSE="verbose"
static final String	W_THRESHOLD	Constant W_THRESHOLD="wThreshold"
static final String	ZS_RISK_BOUND	Constant ZS_RISK_BOUND="zSRiskBound"

Method Summary

Modifier and Type	Method	Description
static Set<String>	getAlgorithmParameters(Algorithm algorithm)	getAlgorithmParameters.
static Set<String>	getBootstrappingParameters(Algorithm algorithm)	getBootstrappingParameters.
static Set<String>	getParameters()	getParameters.
static Set<String>	getScoreParameters(Algorithm algorithm)	getScoreParameters.
static Set<String>	getTestParameters(Algorithm algorithm)	getTestParameters.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

ADD_ORIGINAL_DATASET

public static final String ADD_ORIGINAL_DATASET

Constant ADD_ORIGINAL_DATASET="addOriginalDataset"

See Also:

• Constant Field Values

ALPHA

public static final String ALPHA

Constant ALPHA="alpha"

See Also:

• Constant Field Values

APPLY_R1

public static final String APPLY_R1

Constant APPLY_R1="applyR1"

See Also:

• Constant Field Values

AVG_DEGREE

public static final String AVG_DEGREE

Constant AVG_DEGREE="avgDegree"

See Also:

• Constant Field Values

BASIS_TYPE

public static final String BASIS_TYPE

Constant BASIS_TYPE="basisType"

See Also:

• Constant Field Values

BASIS_SCALE

public static final String BASIS_SCALE

Constant BASIS_TYPE="basisType"

See Also:

• Constant Field Values

CCI_SCORE_ALPHA

public static final String CCI_SCORE_ALPHA

Constant CCI_SCORE_ALPHA="cciScoreAlpha"

See Also:

• Constant Field Values

CG_EXACT

public static final String CG_EXACT

Constant CG_EXACT="cgExact"

See Also:

• Constant Field Values

COEF_HIGH

public static final String COEF_HIGH

Constant COEF_HIGH="coefHigh"

See Also:

• Constant Field Values

COEF_LOW

public static final String COEF_LOW

Constant COEF_LOW="coefLow"

See Also:

• Constant Field Values

COEF_SYMMETRIC

public static final String COEF_SYMMETRIC

Constant COEF_SYMMETRIC="coefSymmetric"

See Also:

• Constant Field Values

COLLIDER_DISCOVERY_RULE

public static final String COLLIDER_DISCOVERY_RULE

Constant COLLIDER_DISCOVERY_RULE="colliderDiscoveryRule"

See Also:

• Constant Field Values

COMPLETE_RULE_SET_USED

public static final String COMPLETE_RULE_SET_USED

Constant COMPLETE_RULE_SET_USED="completeRuleSetUsed"

See Also:

• Constant Field Values

SEPSET_FINDER_METHOD

public static final String SEPSET_FINDER_METHOD

Constant SEPSET_FINDER_METHOD="sepsetFinderMethod"

See Also:

• Constant Field Values

CONCURRENT_FAS

public static final String CONCURRENT_FAS

Constant CONCURRENT_FAS="concurrentFAS"

See Also:

• Constant Field Values

CONFLICT_RULE

public static final String CONFLICT_RULE

Constant CONFLICT_RULE="conflictRule"

See Also:

• Constant Field Values

GUARANTEE_CPDAG

public static final String GUARANTEE_CPDAG

Constant GUARANTEE_CPDAG="guaranteeCpdag"

See Also:

• Constant Field Values

CONNECTED

public static final String CONNECTED

Constant CONNECTED="connected"

See Also:

• Constant Field Values

COV_HIGH

public static final String COV_HIGH

Constant COV_HIGH="covHigh"

See Also:

• Constant Field Values

COV_LOW

public static final String COV_LOW

Constant COV_LOW="covLow"

See Also:

• Constant Field Values

COV_SYMMETRIC

public static final String COV_SYMMETRIC

Constant COV_SYMMETRIC="covSymmetric"

See Also:

• Constant Field Values

CUTOFF_CONSTRAIN_SEARCH

public static final String CUTOFF_CONSTRAIN_SEARCH

Constant CUTOFF_CONSTRAIN_SEARCH="cutoffConstrainSearch"

See Also:

• Constant Field Values

CUTOFF_DATA_SEARCH

public static final String CUTOFF_DATA_SEARCH

Constant CUTOFF_DATA_SEARCH="cutoffDataSearch"

See Also:

• Constant Field Values

CUTOFF_IND_TEST

public static final String CUTOFF_IND_TEST

Constant CUTOFF_IND_TEST="cutoffIndTest"

See Also:

• Constant Field Values

DATA_TYPE

public static final String DATA_TYPE

Constant DATA_TYPE="dataType"

See Also:

• Constant Field Values

DEPTH

public static final String DEPTH

Constant DEPTH="depth"

See Also:

• Constant Field Values

DETERMINISM_THRESHOLD

public static final String DETERMINISM_THRESHOLD

Constant DETERMINISM_THRESHOLD="determinismThreshold"

See Also:

• Constant Field Values

DIFFERENT_GRAPHS

public static final String DIFFERENT_GRAPHS

Constant DIFFERENT_GRAPHS="differentGraphs"

See Also:

• Constant Field Values

DISCRETIZE

public static final String DISCRETIZE

Constant DISCRETIZE="discretize"

See Also:

• Constant Field Values

DO_COLLIDER_ORIENTATION

public static final String DO_COLLIDER_ORIENTATION

Constant DO_COLLIDER_ORIENTATION="doColliderOrientation"

See Also:

• Constant Field Values

ERRORS_NORMAL

public static final String ERRORS_NORMAL

Constant ERRORS_NORMAL="errorsNormal"

See Also:

• Constant Field Values

SKEW_EDGE_THRESHOLD

public static final String SKEW_EDGE_THRESHOLD

Constant SKEW_EDGE_THRESHOLD="skewEdgeThreshold"

See Also:

• Constant Field Values

TWO_CYCLE_SCREENING_THRESHOLD

public static final String TWO_CYCLE_SCREENING_THRESHOLD

Constant TWO_CYCLE_SCREENING_THRESHOLD="twoCycleScreeningThreshold"

See Also:

• Constant Field Values

FASK_DELTA

public static final String FASK_DELTA

Constant FASK_DELTA="faskDelta"

See Also:

• Constant Field Values

FASK_LEFT_RIGHT_RULE

public static final String FASK_LEFT_RIGHT_RULE

Constant FASK_LEFT_RIGHT_RULE="faskLeftRightRule"

See Also:

• Constant Field Values

FASK_ADJACENCY_METHOD

public static final String FASK_ADJACENCY_METHOD

Constant FASK_ADJACENCY_METHOD="faskAdjacencyMethod"

See Also:

• Constant Field Values

FASK_NONEMPIRICAL

public static final String FASK_NONEMPIRICAL

Constant FASK_NONEMPIRICAL="faskNonempirical"

See Also:

• Constant Field Values

FAITHFULNESS_ASSUMED

public static final String FAITHFULNESS_ASSUMED

Constant FAITHFULNESS_ASSUMED="faithfulnessAssumed"

See Also:

• Constant Field Values

FAS_RULE

public static final String FAS_RULE

Constant FAS_RULE="fasRule"

See Also:

• Constant Field Values

FAST_ICA_A

public static final String FAST_ICA_A

Constant FAST_ICA_A="fastIcaA"

See Also:

• Constant Field Values

FAST_ICA_MAX_ITER

public static final String FAST_ICA_MAX_ITER

Constant FAST_ICA_MAX_ITER="fastIcaMaxIter"

See Also:

• Constant Field Values

FAST_ICA_TOLERANCE

public static final String FAST_ICA_TOLERANCE

Constant FAST_ICA_TOLERANCE="fastIcaTolerance"

See Also:

• Constant Field Values

THRESHOLD_B

public static final String THRESHOLD_B

Constant THRESHOLD_B="thresholdBHat"

See Also:

• Constant Field Values

GUARANTEE_ACYCLIC

public static final String GUARANTEE_ACYCLIC

Constant GUARANTEE_ACYCLIC="guaranteeAcyclic"

See Also:

• Constant Field Values

THRESHOLD_W

public static final String THRESHOLD_W

Constant THRESHOLD_SPINE="thresholdSpine"

See Also:

• Constant Field Values

ORIENTATION_ALPHA

public static final String ORIENTATION_ALPHA

Constant ORIENTATION_ALPHA="orientationAlpha"

See Also:

• Constant Field Values

FISHER_EPSILON

public static final String FISHER_EPSILON

Constant FISHER_EPSILON="fisherEpsilon"

See Also:

• Constant Field Values

GENERAL_SEM_ERROR_TEMPLATE

public static final String GENERAL_SEM_ERROR_TEMPLATE

Constant GENERAL_SEM_ERROR_TEMPLATE="generalSemErrorTemplate"

See Also:

• Constant Field Values

GENERAL_SEM_FUNCTION_TEMPLATE_LATENT

public static final String GENERAL_SEM_FUNCTION_TEMPLATE_LATENT

Constant GENERAL_SEM_FUNCTION_TEMPLATE_LATENT="generalSemFunctionTemplateLatent"

See Also:

• Constant Field Values

GENERAL_SEM_FUNCTION_TEMPLATE_MEASURED

public static final String GENERAL_SEM_FUNCTION_TEMPLATE_MEASURED

Constant GENERAL_SEM_FUNCTION_TEMPLATE_MEASURED="generalSemFunctionTemplateMeasured"

See Also:

• Constant Field Values

GENERAL_SEM_PARAMETER_TEMPLATE

public static final String GENERAL_SEM_PARAMETER_TEMPLATE

Constant GENERAL_SEM_PARAMETER_TEMPLATE="generalSemParameterTemplate"

See Also:

• Constant Field Values

GUARANTEE_IID

public static final String GUARANTEE_IID

Constant GUARANTEE_IID="guaranteeIid"

See Also:

• Constant Field Values

IA

public static final String IA

Constant IA="ia"

See Also:

• Constant Field Values

INCLUDE_NEGATIVE_COEFS

public static final String INCLUDE_NEGATIVE_COEFS

Constant INCLUDE_NEGATIVE_COEFS="includeNegativeCoefs"

See Also:

• Constant Field Values

INCLUDE_NEGATIVE_SKEWS_FOR_BETA

public static final String INCLUDE_NEGATIVE_SKEWS_FOR_BETA

Constant INCLUDE_NEGATIVE_SKEWS_FOR_BETA="includeNegativeSkewsForBeta"

See Also:

• Constant Field Values

INCLUDE_POSITIVE_COEFS

public static final String INCLUDE_POSITIVE_COEFS

Constant INCLUDE_POSITIVE_COEFS="includePositiveCoefs"

See Also:

• Constant Field Values

INCLUDE_POSITIVE_SKEWS_FOR_BETA

public static final String INCLUDE_POSITIVE_SKEWS_FOR_BETA

Constant INCLUDE_POSITIVE_SKEWS_FOR_BETA="includePositiveSkewsForBeta"

See Also:

• Constant Field Values

INCLUDE_STRUCTURE_MODEL

public static final String INCLUDE_STRUCTURE_MODEL

Constant INCLUDE_STRUCTURE_MODEL="include_structure_model"

See Also:

• Constant Field Values

INTERVAL_BETWEEN_RECORDINGS

public static final String INTERVAL_BETWEEN_RECORDINGS

Constant INTERVAL_BETWEEN_RECORDINGS="intervalBetweenRecordings"

See Also:

• Constant Field Values

INTERVAL_BETWEEN_SHOCKS

public static final String INTERVAL_BETWEEN_SHOCKS

Constant INTERVAL_BETWEEN_SHOCKS="intervalBetweenShocks"

See Also:

• Constant Field Values

IPEN

public static final String IPEN

Constant IPEN="ipen"

See Also:

• Constant Field Values

IS

public static final String IS

Constant IS="is"

See Also:

• Constant Field Values

ITR

public static final String ITR

Constant ITR="itr"

See Also:

• Constant Field Values

KCI_ALPHA

public static final String KCI_ALPHA

Constant KCI_ALPHA="kciAlpha"

See Also:

• Constant Field Values

KCI_CUTOFF

public static final String KCI_CUTOFF

Constant KCI_CUTOFF="kciCutoff"

See Also:

• Constant Field Values

KCI_EPSILON

public static final String KCI_EPSILON

Constant KCI_EPSILON="kciEpsilon"

See Also:

• Constant Field Values

KCI_NUM_BOOTSTRAPS

public static final String KCI_NUM_BOOTSTRAPS

Constant KCI_NUM_BOOTSTRAPS="kciNumBootstraps"

See Also:

• Constant Field Values

KCI_USE_APPROXIMATION

public static final String KCI_USE_APPROXIMATION

Constant KCI_USE_APPROXIMATION="kciUseApproximation"

See Also:

• Constant Field Values

SCALING_FACTOR

public static final String SCALING_FACTOR

Constant BANDWIDTH_ADJUSTMENT="scalingFactor"

See Also:

• Constant Field Values

KERNEL_REGRESSION_SAMPLE_SIZE

public static final String KERNEL_REGRESSION_SAMPLE_SIZE

Constant KERNEL_REGRESSION_SAMPLE_SIZE="kernelRegressionSampleSize"

See Also:

• Constant Field Values

KERNEL_TYPE

public static final String KERNEL_TYPE

Constant KERNEL_TYPE="kernelType"

See Also:

• Constant Field Values

POLYNOMIAL_DEGREE

public static final String POLYNOMIAL_DEGREE

Constant POLYNOMIAL_DEGREE="polynomialDegree"

See Also:

• Constant Field Values

POLYNOMIAL_CONSTANT

public static final String POLYNOMIAL_CONSTANT

Constant POLYNOMIAL_CONSTANT="polynomialConstant"

See Also:

• Constant Field Values

KERNEL_WIDTH

public static final String KERNEL_WIDTH

Constant KERNEL_WIDTH="kernelWidth"

See Also:

• Constant Field Values

LATENT_MEASURED_IMPURE_PARENTS

public static final String LATENT_MEASURED_IMPURE_PARENTS

Constant LATENT_MEASURED_IMPURE_PARENTS="latentMeasuredImpureParents"

See Also:

• Constant Field Values

LOWER_BOUND

public static final String LOWER_BOUND

Constant LOWER_BOUND="lowerBound"

See Also:

• Constant Field Values

MAX_CATEGORIES

public static final String MAX_CATEGORIES

Constant MAX_CATEGORIES="maxCategories"

See Also:

• Constant Field Values

MAX_DEGREE

public static final String MAX_DEGREE

Constant MAX_DEGREE="maxDegree"

See Also:

• Constant Field Values

MAX_DISTINCT_VALUES_DISCRETE

public static final String MAX_DISTINCT_VALUES_DISCRETE

Constant MAX_DISTINCT_VALUES_DISCRETE="maxDistinctValuesDiscrete"

See Also:

• Constant Field Values

MAX_INDEGREE

public static final String MAX_INDEGREE

Constant MAX_INDEGREE="maxIndegree"

See Also:

• Constant Field Values

MAX_ITERATIONS

public static final String MAX_ITERATIONS

Constant MAX_ITERATIONS="maxIterations"

See Also:

• Constant Field Values

MAX_OUTDEGREE

public static final String MAX_OUTDEGREE

Constant MAX_OUTDEGREE="maxOutdegree"

See Also:

• Constant Field Values

MAX_DISCRIMINATING_PATH_LENGTH

public static final String MAX_DISCRIMINATING_PATH_LENGTH

Constant MAX_PATH_LENGTH="maxPathLength"

See Also:

• Constant Field Values

MAXIT

public static final String MAXIT

Constant MAXIT="maxit"

See Also:

• Constant Field Values

MEAN_HIGH

public static final String MEAN_HIGH

Constant MEAN_HIGH="meanHigh"

See Also:

• Constant Field Values

MEAN_LOW

public static final String MEAN_LOW

Constant MEAN_LOW="meanLow"

See Also:

• Constant Field Values

MEASURED_MEASURED_IMPURE_ASSOCIATIONS

public static final String MEASURED_MEASURED_IMPURE_ASSOCIATIONS

Constant MEASURED_MEASURED_IMPURE_ASSOCIATIONS="measuredMeasuredImpureAssociations"

See Also:

• Constant Field Values

MEASURED_MEASURED_IMPURE_PARENTS

public static final String MEASURED_MEASURED_IMPURE_PARENTS

Constant MEASURED_MEASURED_IMPURE_PARENTS="measuredMeasuredImpureParents"

See Also:

• Constant Field Values

MEASUREMENT_MODEL_DEGREE

public static final String MEASUREMENT_MODEL_DEGREE

Constant MEASUREMENT_MODEL_DEGREE="measurementModelDegree"

See Also:

• Constant Field Values

MEASUREMENT_VARIANCE

public static final String MEASUREMENT_VARIANCE

Constant MEASUREMENT_VARIANCE="measurementVariance"

See Also:

• Constant Field Values

MGM_PARAM1

public static final String MGM_PARAM1

Constant MGM_PARAM1="mgmParam1"

See Also:

• Constant Field Values

MGM_PARAM2

public static final String MGM_PARAM2

Constant MGM_PARAM2="mgmParam2"

See Also:

• Constant Field Values

MGM_PARAM3

public static final String MGM_PARAM3

Constant MGM_PARAM3="mgmParam3"

See Also:

• Constant Field Values

MIN_CATEGORIES

public static final String MIN_CATEGORIES

Constant MIN_CATEGORIES="minCategories"

See Also:

• Constant Field Values

NO_RANDOMLY_DETERMINED_INDEPENDENCE

public static final String NO_RANDOMLY_DETERMINED_INDEPENDENCE

Constant NO_RANDOMLY_DETERMINED_INDEPENDENCE="noRandomlyDeterminedIndependence"

See Also:

• Constant Field Values

NUM_BASIS_FUNCTIONS

public static final String NUM_BASIS_FUNCTIONS

Constant NUM_BASIS_FUNCTIONS="numBasisFunctions"

See Also:

• Constant Field Values

NUM_BSC_BOOTSTRAP_SAMPLES

public static final String NUM_BSC_BOOTSTRAP_SAMPLES

Constant NUM_BSC_BOOTSTRAP_SAMPLES="numBscBootstrapSamples"

See Also:

• Constant Field Values

NUM_CATEGORIES

public static final String NUM_CATEGORIES

Constant NUM_CATEGORIES="numCategories"

See Also:

• Constant Field Values

NUM_CATEGORIES_TO_DISCRETIZE

public static final String NUM_CATEGORIES_TO_DISCRETIZE

Constant NUM_CATEGORIES_TO_DISCRETIZE="numCategoriesToDiscretize"

See Also:

• Constant Field Values

NUM_LAGS

public static final String NUM_LAGS

Constant NUM_LAGS="numLags"

See Also:

• Constant Field Values

NUM_LATENTS

public static final String NUM_LATENTS

Constant NUM_LATENTS="numLatents"

See Also:

• Constant Field Values

NUM_MEASURES

public static final String NUM_MEASURES

Constant NUM_MEASURES="numMeasures"

See Also:

• Constant Field Values

PROBABILITY_OF_EDGE

public static final String PROBABILITY_OF_EDGE

Constant PROBABILITY_OF_EDGE="probabilityOfEdge"

See Also:

• Constant Field Values

NUM_RANDOMIZED_SEARCH_MODELS

public static final String NUM_RANDOMIZED_SEARCH_MODELS

Constant NUM_RANDOMIZED_SEARCH_MODELS="numRandomizedSearchModels"

See Also:

• Constant Field Values

NUM_RUNS

public static final String NUM_RUNS

Constant NUM_RUNS="numRuns"

See Also:

• Constant Field Values

NUM_STRUCTURAL_EDGES

public static final String NUM_STRUCTURAL_EDGES

Constant NUM_STRUCTURAL_EDGES="numStructuralEdges"

See Also:

• Constant Field Values

NUM_STRUCTURAL_NODES

public static final String NUM_STRUCTURAL_NODES

Constant NUM_STRUCTURAL_NODES="numStructuralNodes"

See Also:

• Constant Field Values

NUMBER_RESAMPLING

public static final String NUMBER_RESAMPLING

Constant NUMBER_RESAMPLING="numberResampling"

See Also:

• Constant Field Values

ORIENT_TOWARD_DCONNECTIONS

public static final String ORIENT_TOWARD_DCONNECTIONS

Constant ORIENT_TOWARD_DCONNECTIONS="orientTowardDConnections"

See Also:

• Constant Field Values

ORIENT_VISIBLE_FEEDBACK_LOOPS

public static final String ORIENT_VISIBLE_FEEDBACK_LOOPS

Constant ORIENT_VISIBLE_FEEDBACK_LOOPS="orientVisibleFeedbackLoops"

See Also:

• Constant Field Values

OUTPUT_RBD

public static final String OUTPUT_RBD

Constant OUTPUT_RBD="outputRBD"

See Also:

• Constant Field Values

PARALLELIZED

public static final String PARALLELIZED

Constant PARALLELIZED="parallelized"

See Also:

• Constant Field Values

PENALTY_DISCOUNT

public static final String PENALTY_DISCOUNT

Constant PENALTY_DISCOUNT="penaltyDiscount"

See Also:

• Constant Field Values

PENALTY_DISCOUNT_ZS

public static final String PENALTY_DISCOUNT_ZS

Constant PENALTY_DISCOUNT_ZS="penaltyDiscountZs"

See Also:

• Constant Field Values

TRUNCATION_LIMIT

public static final String TRUNCATION_LIMIT

Constant TRUNCATION_LIMIT="truncationLimit"

See Also:

• Constant Field Values

EBIC_GAMMA

public static final String EBIC_GAMMA

Constant EBIC_GAMMA="ebicGamma"

See Also:

• Constant Field Values

PERCENT_DISCRETE

public static final String PERCENT_DISCRETE

Constant PERCENT_DISCRETE="percentDiscrete"

See Also:

• Constant Field Values

PERCENT_RESAMPLE_SIZE

public static final String PERCENT_RESAMPLE_SIZE

Constant PERCENT_RESAMPLE_SIZE="percentResampleSize"

See Also:

• Constant Field Values

POSSIBLE_MSEP_DONE

public static final String POSSIBLE_MSEP_DONE

Constant POSSIBLE_MSEP_DONE="possibleMsepDone"

See Also:

• Constant Field Values

PROB_CYCLE

public static final String PROB_CYCLE

Constant PROB_CYCLE="probCycle"

See Also:

• Constant Field Values

PROB_TWO_CYCLE

public static final String PROB_TWO_CYCLE

Constant PROB_TWO_CYCLE="probTwoCycle"

See Also:

• Constant Field Values

RANDOM_SELECTION_SIZE

public static final String RANDOM_SELECTION_SIZE

Constant RANDOM_SELECTION_SIZE="randomSelectionSize"

See Also:

• Constant Field Values

RANDOMIZE_COLUMNS

public static final String RANDOMIZE_COLUMNS

Constant RANDOMIZE_COLUMNS="randomizeColumns"

See Also:

• Constant Field Values

RCIT_NUM_FEATURES

public static final String RCIT_NUM_FEATURES

Constant RCIT_NUM_FEATURES="rcitNumFeatures"

See Also:

• Constant Field Values

RESAMPLING_ENSEMBLE

public static final String RESAMPLING_ENSEMBLE

Constant RESAMPLING_ENSEMBLE="resamplingEnsemble"

See Also:

• Constant Field Values

RESAMPLING_WITH_REPLACEMENT

public static final String RESAMPLING_WITH_REPLACEMENT

Constant RESAMPLING_WITH_REPLACEMENT="resamplingWithReplacement"

See Also:

• Constant Field Values

PRIOR_EQUIVALENT_SAMPLE_SIZE

public static final String PRIOR_EQUIVALENT_SAMPLE_SIZE

Constant PRIOR_EQUIVALENT_SAMPLE_SIZE="priorEquivalentSampleSize"

See Also:

• Constant Field Values

SAMPLE_SIZE

public static final String SAMPLE_SIZE

Constant SAMPLE_SIZE="sampleSize"

See Also:

• Constant Field Values

SAVE_LATENT_VARS

public static final String SAVE_LATENT_VARS

Constant SAVE_LATENT_VARS="saveLatentVars"

See Also:

• Constant Field Values

SCALE_FREE_ALPHA

public static final String SCALE_FREE_ALPHA

Constant SCALE_FREE_ALPHA="scaleFreeAlpha"

See Also:

• Constant Field Values

SCALE_FREE_BETA

public static final String SCALE_FREE_BETA

Constant SCALE_FREE_BETA="scaleFreeBeta"

See Also:

• Constant Field Values

SCALE_FREE_DELTA_IN

public static final String SCALE_FREE_DELTA_IN

Constant SCALE_FREE_DELTA_IN="scaleFreeDeltaIn"

See Also:

• Constant Field Values

SCALE_FREE_DELTA_OUT

public static final String SCALE_FREE_DELTA_OUT

Constant SCALE_FREE_DELTA_OUT="scaleFreeDeltaOut"

See Also:

• Constant Field Values

SELF_LOOP_COEF

public static final String SELF_LOOP_COEF

Constant SELF_LOOP_COEF="selfLoopCoef"

See Also:

• Constant Field Values

SKIP_NUM_RECORDS

public static final String SKIP_NUM_RECORDS

Constant SKIP_NUM_RECORDS="skipNumRecords"

See Also:

• Constant Field Values

STABLE_FAS

public static final String STABLE_FAS

Constant STABLE_FAS="stableFAS"

See Also:

• Constant Field Values

STANDARDIZE

public static final String STANDARDIZE

Constant STANDARDIZE="standardize"

See Also:

• Constant Field Values

STRUCTURE_PRIOR

public static final String STRUCTURE_PRIOR

Constant STRUCTURE_PRIOR="structurePrior"

See Also:

• Constant Field Values

SYMMETRIC_FIRST_STEP

public static final String SYMMETRIC_FIRST_STEP

Constant SYMMETRIC_FIRST_STEP="symmetricFirstStep"

See Also:

• Constant Field Values

TARGET_NAME

public static final String TARGET_NAME

Constant TARGET_NAME="targetName"

See Also:

• Constant Field Values

THR

public static final String THR

Constant THR="thr"

See Also:

• Constant Field Values

THRESHOLD_FOR_NUM_EIGENVALUES

public static final String THRESHOLD_FOR_NUM_EIGENVALUES

Constant THRESHOLD_FOR_NUM_EIGENVALUES="thresholdForNumEigenvalues"

See Also:

• Constant Field Values

THRESHOLD_NO_RANDOM_CONSTRAIN_SEARCH

public static final String THRESHOLD_NO_RANDOM_CONSTRAIN_SEARCH

Constant THRESHOLD_NO_RANDOM_CONSTRAIN_SEARCH="thresholdNoRandomConstrainSearch"

See Also:

• Constant Field Values

THRESHOLD_NO_RANDOM_DATA_SEARCH

public static final String THRESHOLD_NO_RANDOM_DATA_SEARCH

Constant THRESHOLD_NO_RANDOM_DATA_SEARCH="thresholdNoRandomDataSearch"

See Also:

• Constant Field Values

TWO_CYCLE_ALPHA

public static final String TWO_CYCLE_ALPHA

Constant TWO_CYCLE_ALPHA="twoCycleAlpha"

See Also:

• Constant Field Values

UPPER_BOUND

public static final String UPPER_BOUND

Constant UPPER_BOUND="upperBound"

See Also:

• Constant Field Values

USE_CORR_DIFF_ADJACENCIES

public static final String USE_CORR_DIFF_ADJACENCIES

Constant USE_CORR_DIFF_ADJACENCIES="useCorrDiffAdjacencies"

See Also:

• Constant Field Values

USE_FAS_ADJACENCIES

public static final String USE_FAS_ADJACENCIES

Constant USE_FAS_ADJACENCIES="useFasAdjacencies"

See Also:

• Constant Field Values

USE_GAP

public static final String USE_GAP

Constant USE_GAP="useGap"

See Also:

• Constant Field Values

USE_MAX_P_HEURISTIC

public static final String USE_MAX_P_HEURISTIC

Constant USE_MAX_P_HEURISTIC="useMaxPHeuristic"

See Also:

• Constant Field Values

USE_MAX_P_ORIENTATION_HEURISTIC

public static final String USE_MAX_P_ORIENTATION_HEURISTIC

Constant USE_MAX_P_ORIENTATION_HEURISTIC="useMaxPOrientationHeuristic"

See Also:

• Constant Field Values

USE_SKEW_ADJACENCIES

public static final String USE_SKEW_ADJACENCIES

Constant USE_SKEW_ADJACENCIES="useSkewAdjacencies"

See Also:

• Constant Field Values

USE_WISHART

public static final String USE_WISHART

Constant USE_WISHART="useWishart"

See Also:

• Constant Field Values

CHECK_TYPE

public static final String CHECK_TYPE

Constant CHECK_TYPE="checkType"

See Also:

• Constant Field Values

VAR_HIGH

public static final String VAR_HIGH

Constant VAR_HIGH="varHigh"

See Also:

• Constant Field Values

VAR_LOW

public static final String VAR_LOW

Constant VAR_LOW="varLow"

See Also:

• Constant Field Values

VERBOSE

public static final String VERBOSE

Constant VERBOSE="verbose"

See Also:

• Constant Field Values

SEM_BIC_RULE

public static final String SEM_BIC_RULE

Constant SEM_BIC_RULE="semBicRule"

See Also:

• Constant Field Values

SEM_GIC_RULE

public static final String SEM_GIC_RULE

Constant SEM_GIC_RULE="semGicRule"

See Also:

• Constant Field Values

SEM_BIC_STRUCTURE_PRIOR

public static final String SEM_BIC_STRUCTURE_PRIOR

Constant SEM_BIC_STRUCTURE_PRIOR="semBicStructurePrior"

See Also:

• Constant Field Values

POISSON_LAMBDA

public static final String POISSON_LAMBDA

Constant POISSON_LAMBDA="poissonLambda"

See Also:

• Constant Field Values

USE_BES

public static final String USE_BES

Constant USE_BES="useBes"

See Also:

• Constant Field Values

NUM_STARTS

public static final String NUM_STARTS

Constant NUM_STARTS="numStarts"

See Also:

• Constant Field Values

CACHE_SCORES

public static final String CACHE_SCORES

Constant CACHE_SCORES="cacheScores"

See Also:

• Constant Field Values

BOSS_ALG

public static final String BOSS_ALG

Constant BOSS_ALG="bossAlg"

See Also:

• Constant Field Values

OUTPUT_CPDAG

public static final String OUTPUT_CPDAG

Constant OUTPUT_CPDAG="outputCpdag"

See Also:

• Constant Field Values

ZS_RISK_BOUND

public static final String ZS_RISK_BOUND

Constant ZS_RISK_BOUND="zSRiskBound"

See Also:

• Constant Field Values

NUM_ROUNDS

public static final String NUM_ROUNDS

Constant NUM_ROUNDS="numRounds"

See Also:

• Constant Field Values

GRASP_CHECK_COVERING

public static final String GRASP_CHECK_COVERING

Constant GRASP_CHECK_COVERING="graspCheckCovering"

See Also:

• Constant Field Values

GRASP_FORWARD_TUCK_ONLY

public static final String GRASP_FORWARD_TUCK_ONLY

Constant GRASP_FORWARD_TUCK_ONLY="graspForwardTuckOnly"

See Also:

• Constant Field Values

GRASP_BREAK_AFTER_IMPROVEMENT

public static final String GRASP_BREAK_AFTER_IMPROVEMENT

Constant GRASP_BREAK_AFTER_IMPROVEMENT="graspBreakAFterImprovement"

See Also:

• Constant Field Values

GRASP_ORDERED_ALG

public static final String GRASP_ORDERED_ALG

Constant GRASP_ORDERED_ALG="graspOrderedAlg"

See Also:

• Constant Field Values

GRASP_USE_SCORE

public static final String GRASP_USE_SCORE

Constant GRASP_USE_SCORE="graspUseScore"

See Also:

• Constant Field Values

GRASP_USE_RASKUTTI_UHLER

public static final String GRASP_USE_RASKUTTI_UHLER

Constant GRASP_USE_RASKUTTI_UHLER="graspUseRaskuttiUhler"

See Also:

• Constant Field Values

USE_DATA_ORDER

public static final String USE_DATA_ORDER

Constant USE_DATA_ORDER="useDataOrder"

See Also:

• Constant Field Values

ALLOW_INTERNAL_RANDOMNESS

public static final String ALLOW_INTERNAL_RANDOMNESS

Constant ALLOW_INTERNAL_RANDOMNESS="allowInternalRandomness"

See Also:

• Constant Field Values

GRASP_DEPTH

public static final String GRASP_DEPTH

Constant GRASP_DEPTH="graspDepth"

See Also:

• Constant Field Values

GRASP_SINGULAR_DEPTH

public static final String GRASP_SINGULAR_DEPTH

Constant GRASP_SINGULAR_DEPTH="graspSingularDepth"

See Also:

• Constant Field Values

GRASP_NONSINGULAR_DEPTH

public static final String GRASP_NONSINGULAR_DEPTH

Constant GRASP_NONSINGULAR_DEPTH="graspNonSingularDepth"

See Also:

• Constant Field Values

GRASP_TOLERANCE_DEPTH

public static final String GRASP_TOLERANCE_DEPTH

Constant GRASP_TOLERANCE_DEPTH="graspToleranceDepth"

See Also:

• Constant Field Values

GRASP_ALG

public static final String GRASP_ALG

Constant GRASP_ALG="graspAlg"

See Also:

• Constant Field Values

TIMEOUT

public static final String TIMEOUT

Constant TIMEOUT="timeout"

See Also:

• Constant Field Values

TEST_TIMEOUT

public static final String TEST_TIMEOUT

Constant TEST_TIMEOUT="testTimeout"

See Also:

• Constant Field Values

GRASP_USE_VP_SCORING

public static final String GRASP_USE_VP_SCORING

Constant GRASP_USE_VP_SCORING="graspUseVpScoring"

See Also:

• Constant Field Values

SIMULATION_ERROR_TYPE

public static final String SIMULATION_ERROR_TYPE

Constant SIMULATION_ERROR_TYPE="simulationErrorType"

See Also:

• Constant Field Values

SIMULATION_PARAM1

public static final String SIMULATION_PARAM1

Constant SIMULATION_PARAM1="simulationParam1"

See Also:

• Constant Field Values

SIMULATION_PARAM2

public static final String SIMULATION_PARAM2

Constant SIMULATION_PARAM2="simulationParam2"

See Also:

• Constant Field Values

SELECTION_MIN_EFFECT

public static final String SELECTION_MIN_EFFECT

Constant SELECTION_MIN_EFFECT="selectionMinEffect"

See Also:

• Constant Field Values

NUM_SUBSAMPLES

public static final String NUM_SUBSAMPLES

Constant NUM_SUBSAMPLES="numSubsamples"

See Also:

• Constant Field Values

TARGETS

public static final String TARGETS

Constant TARGETS="targets"

See Also:

• Constant Field Values

MB

public static final String MB

Constant MB="mb"

See Also:

• Constant Field Values

TOP_BRACKET

public static final String TOP_BRACKET

Constant TOP_BRACKET="topBracket"

See Also:

• Constant Field Values

TIME_LAG

public static final String TIME_LAG

Constant TIME_LAG="timeLag"

See Also:

• Constant Field Values

PRECOMPUTE_COVARIANCES

public static final String PRECOMPUTE_COVARIANCES

Constant PRECOMPUTE_COVARIANCES="precomputeCovariances"

See Also:

• Constant Field Values

IMAGES_META_ALG

public static final String IMAGES_META_ALG

Constant IMAGES_META_ALG="imagesMetaAlg"

See Also:

• Constant Field Values

SEED

public static final String SEED

Constant SEED="seed"

See Also:

• Constant Field Values

SIGNIFICANCE_CHECKED

public static final String SIGNIFICANCE_CHECKED

Constant SIGNIFICANCE_CHECKED="significanceChecked"

See Also:

• Constant Field Values

PROB_REMOVE_COLUMN

public static final String PROB_REMOVE_COLUMN

Constant PROB_REMOVE_COLUMN="probRemoveColumn"

See Also:

• Constant Field Values

SAVE_BOOTSTRAP_GRAPHS

public static final String SAVE_BOOTSTRAP_GRAPHS

Constant SAVE_BOOTSTRAP_GRAPHS="saveBootstrapGraphs"

See Also:

• Constant Field Values

LAMBDA1

public static final String LAMBDA1

Constant LAMBDA1="lambda1"

See Also:

• Constant Field Values

W_THRESHOLD

public static final String W_THRESHOLD

Constant W_THRESHOLD="wThreshold"

See Also:

• Constant Field Values

CPDAG

public static final String CPDAG

Constant CPDAG="cpdag"

See Also:

• Constant Field Values

TRIMMING_STYLE

public static final String TRIMMING_STYLE

Constant TRIMMING_STYLE="trimmingStyle"

See Also:

• Constant Field Values

NUMBER_OF_EXPANSIONS

public static final String NUMBER_OF_EXPANSIONS

Constant NUMBER_OF_EXPANSIONS="numberOfExpansions"

See Also:

• Constant Field Values

CSTAR_CPDAG_ALGORITHM

public static final String CSTAR_CPDAG_ALGORITHM

Constant CSTAR_CPDAG_ALGORITHM="cstarCpdagAlgorithm"

See Also:

• Constant Field Values

FILE_OUT_PATH

public static final String FILE_OUT_PATH

Constant FILE_OUT_PATH="fileOutPath"

See Also:

• Constant Field Values

REMOVE_EFFECT_NODES

public static final String REMOVE_EFFECT_NODES

Constant REMOVE_EFFECT_NODES="removeEffectNodes"

See Also:

• Constant Field Values

SAMPLE_STYLE

public static final String SAMPLE_STYLE

Constant SAMPLE_STYLE="sampleStyle"

See Also:

• Constant Field Values

NUM_THREADS

public static final String NUM_THREADS

Constant NUM_THREADS="numThreads"

See Also:

• Constant Field Values

BOOTSTRAPPING_NUM_THREADS

public static final String BOOTSTRAPPING_NUM_THREADS

Constant BOOTSTRAPPING_NUM_THEADS="bootstrappingNumThreads"

See Also:

• Constant Field Values

USE_PSEUDOINVERSE

public static final String USE_PSEUDOINVERSE

Constant USE_PSEUDOINVERSE="usePseudoinverse"

See Also:

• Constant Field Values

COMPARE_GRAPH_ALGCOMP

public static final String COMPARE_GRAPH_ALGCOMP

Constant USE_PSEUDOINVERSE_FOR_LATENT="usePseudoinverseForLatent"

See Also:

• Constant Field Values

MIN_SAMPLE_SIZE_PER_CELL

public static final String MIN_SAMPLE_SIZE_PER_CELL

Constant COMPARE_GRAPH_ALGCOMP="compareGraphAlgcomp"

See Also:

• Constant Field Values

MAX_SCORE_DROP

public static final String MAX_SCORE_DROP

Constant MAX_SCORE_DROP="maxScoreDrop"

See Also:

• Constant Field Values

GUARANTEE_PAG

public static final String GUARANTEE_PAG

Constant GUARANTEE_PAG="guaranteePag"

See Also:

• Constant Field Values

REMOVE_ALMOST_CYCLES

public static final String REMOVE_ALMOST_CYCLES

Constant REMOVE_ALMOST_CYCLES="removeAlmostCycles"

See Also:

• Constant Field Values

DO_DDP_EDGE_REMOVAL_STEP

public static final String DO_DDP_EDGE_REMOVAL_STEP

Constant DO_DDP_EDGE_REMOVAL_STEP="doDdpEdgeRemovalStep"

See Also:

• Constant Field Values

ENSURE_MARKOV

public static final String ENSURE_MARKOV

Constant ENSURE_MARKOV="ensureMarkov"

See Also:

• Constant Field Values

PC_HEURISTIC

public static String PC_HEURISTIC

Constant PC_HEURISTIC="pcHeuristic"

LV_LITE_STARTS_WITH

public static String LV_LITE_STARTS_WITH

Constant LV_LITE_STARTS_WITGH="LvLiteStartsWith"

EXTRA_EDGE_REMOVAL_STEP

public static String EXTRA_EDGE_REMOVAL_STEP

Constant EXTRA_EDGE_REMOVAL_STEP="extraEdgeRemovalStep"

MAX_BLOCKING_PATH_LENGTH

public static final String MAX_BLOCKING_PATH_LENGTH

Constant MAX_BLOCKING_PATH_LENGTH="maxBlockingPathLength"

See Also:

• Constant Field Values

MAX_SEPSET_SIZE

public static final String MAX_SEPSET_SIZE

Constant MAX_SEPSET_SIZE="maxSepsetSize"

See Also:

• Constant Field Values

MIN_COUNT_PER_CELL

public static String MIN_COUNT_PER_CELL

Constant MIN_COUNT_PER_CELL="minCountPerCell"

CELL_TABLE_TYPE

public static String CELL_TABLE_TYPE

Constant CELL_COUNT_TYPE="cellCountType"

Method Details

getAlgorithmParameters

public static Set<String> getAlgorithmParameters(Algorithm algorithm)

getAlgorithmParameters.

Parameters:

algorithm - a Algorithm object

Returns:

a Set object

getTestParameters

public static Set<String> getTestParameters(Algorithm algorithm)

getTestParameters.

Parameters:

algorithm - a Algorithm object

Returns:

a Set object

getScoreParameters

public static Set<String> getScoreParameters(Algorithm algorithm)

getScoreParameters.

Parameters:

algorithm - a Algorithm object

Returns:

a Set object

getBootstrappingParameters

public static Set<String> getBootstrappingParameters(Algorithm algorithm)

getBootstrappingParameters.

Parameters:

algorithm - a Algorithm object

Returns:

a Set object

getParameters

public static Set<String> getParameters()

getParameters.

Returns:

a Set object