Package edu.cmu.tetrad.search.work_in_progress

Class Glasso

java.lang.Object

edu.cmu.tetrad.search.work_in_progress.Glasso

public class Glasso
extends Object

A translation from Tibshirani's 2008 Fortran implementation of glasso.

Version:

$Id: $Id

Author:

josephramsey

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	Glasso.Result	Return value of the algorithm.

Constructor Summary

Constructors

Constructor	Description
Glasso(Matrix cov)	Constructor for Glasso.

Method Summary

Modifier and Type	Method	Description
int	getMaxit()	Getter for the field maxit.
int	getN()	Getter for the field n.
edu.cmu.tetrad.search.work_in_progress.Glasso.Rho	getRho()	Getter for the field rho.
Matrix	getSs()	Getter for the field ss.
double	getThr()	Getter for the field thr.
boolean	isIa()	isIa.
boolean	isIpen()	isIpen.
boolean	isIs()	isIs.
boolean	isItr()	isItr.
Glasso.Result	search()	search.
void	setIa(boolean ia)	Setter for the field ia.
void	setIpen(boolean ipen)	Setter for the field ipen.
void	setIs(boolean is)	Setter for the field is.
void	setItr(boolean itr)	Setter for the field itr.
void	setMaxit(int maxit)	Setter for the field maxit.
void	setN(int n)	Setter for the field n.
void	setRhoAllEqual(double rho)	setRhoAllEqual.
void	setThr(double thr)	Setter for the field thr.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

Glasso

public Glasso(Matrix cov)

Constructor for Glasso.

Parameters:

cov - a Matrix object

Method Details

search

public Glasso.Result search()

search.

Returns:

a Glasso.Result object

isIa

public boolean isIa()

isIa.

Returns:

a boolean

setIa

public void setIa(boolean ia)

Setter for the field ia.

Parameters:

ia - a boolean

isIs

public boolean isIs()

isIs.

Returns:

a boolean

setIs

public void setIs(boolean is)

Setter for the field is.

Parameters:

is - a boolean

isItr

public boolean isItr()

isItr.

Returns:

a boolean

setItr

public void setItr(boolean itr)

Setter for the field itr.

Parameters:

itr - a boolean

isIpen

public boolean isIpen()

isIpen.

Returns:

a boolean

setIpen

public void setIpen(boolean ipen)

Setter for the field ipen.

Parameters:

ipen - a boolean

getThr

public double getThr()

Getter for the field thr.

Returns:

a double

setThr

public void setThr(double thr)

Setter for the field thr.

Parameters:

thr - a double

getN

public int getN()

Getter for the field n.

Returns:

a int

setN

public void setN(int n)

Setter for the field n.

Parameters:

n - a int

getSs

public Matrix getSs()

Getter for the field ss.

Returns:

a Matrix object

getRho

public edu.cmu.tetrad.search.work_in_progress.Glasso.Rho getRho()

Getter for the field rho.

Returns:

a Glasso.Rho object

setRhoAllEqual

public void setRhoAllEqual(double rho)

setRhoAllEqual.

Parameters:

rho - a double

getMaxit

public int getMaxit()

Getter for the field maxit.

Returns:

a int

setMaxit

public void setMaxit(int maxit)

Setter for the field maxit.

Parameters:

maxit - a int