Package edu.cmu.tetrad.algcomparison.algorithm.oracle.pag

Class PagSampleRfci

java.lang.Object

edu.cmu.tetrad.algcomparison.algorithm.AbstractBootstrapAlgorithm

edu.cmu.tetrad.algcomparison.algorithm.oracle.pag.PagSampleRfci

All Implemented Interfaces:

Algorithm, ReturnsBootstrapGraphs, HasKnowledge, HasParameters, TetradSerializable, Serializable

@Algorithm(name="PAG-Sampling-RFCI",
           command="pag-sampling-rfci",
           algoType=allow_latent_common_causes)
public class PagSampleRfci
extends AbstractBootstrapAlgorithm
implements Algorithm, HasKnowledge

Jan 29, 2023 3:45:09 PM

Version:

$Id: $Id

Author:

Kevin V. Bui (kvb2univpitt@gmail.com)

See Also:

• Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
static final List<String>	PAG_SAMPLING_RFCI_PARAMETERS	Constant PAG_SAMPLING_RFCI_PARAMETERS
static final List<String>	PROBABILISTIC_TEST_PARAMETERS	Constant PROBABILISTIC_TEST_PARAMETERS
static final List<String>	RFCI_PARAMETERS	Constant RFCI_PARAMETERS

Constructor Summary

Constructors

Constructor	Description
PagSampleRfci()	Constructs a new instance of the PagSampleRfci algorithm.

Method Summary

Modifier and Type	Method	Description
Graph	getComparisonGraph(Graph graph)	Returns the comparison graph based on the true directed graph.
DataType	getDataType()	Retrieves the data type associated with the method.
String	getDescription()	Returns a description of the method.
Knowledge	getKnowledge()	Retrieves the knowledge associated with this method.
List<String>	getParameters()	Retrieves the list of parameters for the method.
Graph	runSearch(DataModel dataSet, Parameters parameters)	Runs the search algorithm using the given data set and parameters.
void	setKnowledge(Knowledge knowledge)	Sets the knowledge associated with this method.

Methods inherited from class edu.cmu.tetrad.algcomparison.algorithm.AbstractBootstrapAlgorithm

getBootstrapGraphs, search

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface edu.cmu.tetrad.algcomparison.algorithm.Algorithm

search

Field Details

PAG_SAMPLING_RFCI_PARAMETERS

public static final List<String> PAG_SAMPLING_RFCI_PARAMETERS

Constant PAG_SAMPLING_RFCI_PARAMETERS

RFCI_PARAMETERS

public static final List<String> RFCI_PARAMETERS

Constant RFCI_PARAMETERS

PROBABILISTIC_TEST_PARAMETERS

public static final List<String> PROBABILISTIC_TEST_PARAMETERS

Constant PROBABILISTIC_TEST_PARAMETERS

Constructor Details

PagSampleRfci

public PagSampleRfci()

Constructs a new instance of the PagSampleRfci algorithm.

Method Details

runSearch

public Graph runSearch(DataModel dataSet,
 Parameters parameters)

Runs the search algorithm using the given data set and parameters.

Parameters:

dataSet - the data set to perform the search on

parameters - the parameters for the search algorithm

Returns:

the graph resulting from the search algorithm

getComparisonGraph

public Graph getComparisonGraph(Graph graph)

Returns the comparison graph based on the true directed graph.

Specified by:

getComparisonGraph in interface Algorithm

Parameters:

graph - The true directed graph.

Returns:

The comparison graph.

getDescription

public String getDescription()

Returns a description of the method.

Specified by:

getDescription in interface Algorithm

Returns:

The description of the method.

getDataType

public DataType getDataType()

Retrieves the data type associated with the method.

Specified by:

getDataType in interface Algorithm

Returns:

the data type of the method, which is discrete.

getParameters

public List<String> getParameters()

Retrieves the list of parameters for the method.

Specified by:

getParameters in interface HasParameters

Returns:

the list of parameters for the method

getKnowledge

public Knowledge getKnowledge()

Retrieves the knowledge associated with this method.

Specified by:

getKnowledge in interface HasKnowledge

Returns:

The knowledge associated with this method.

setKnowledge

public void setKnowledge(Knowledge knowledge)

Sets the knowledge associated with this method.

Specified by:

setKnowledge in interface HasKnowledge

Parameters:

knowledge - the knowledge object to be set