Package edu.cmu.tetrad.study.performance

Class PerformanceTests

java.lang.Object

edu.cmu.tetrad.study.performance.PerformanceTests

public class PerformanceTests
extends Object

Runs some basic performance tests of various algorithm.

Version:

$Id: $Id

Author:

josephramsey

Constructor Summary

Constructors

Constructor	Description
PerformanceTests()	This class represents a set of performance tests for a certain application.

Method Summary

Modifier and Type	Method	Description
static String	endpointMisclassification(List<Node> _nodes, Graph estGraph, Graph refGraph)	endpointMisclassification.
static void	main(String... args)	main.
void	printGraphDegrees()	printGraphDegrees.
void	printStuffForKlea()	printStuffForKlea.
void	testCompareDagToCPDAG(int numLatents)	testCompareDagToCPDAG.
void	testComparePcVersions(int numVars, double edgeFactor, int numLatents)	testComparePcVersions.
void	testCpc(int numVars, double edgeFactor, int numCases)	testCpc.
void	testCpcStable(int numVars, double edgeFactor, int numCases, double alpha)	testCpcStable.
void	testFci(int numVars, double edgeFactor, int numCases)	testFci.
void	testFges(int numVars, double edgeFactor, int numCases, double penaltyDiscount)	testFges.
void	testFgesComparisonContinuous(int numVars, double edgeFactor, int numCases, int numRuns)	testFgesComparisonContinuous.
void	testFgesComparisonDiscrete(int numVars, double edgeFactor, int numCases, int numRuns)	testFgesComparisonDiscrete.
void	testFgesFci(int numVars, double edgeFactor)	testGfci.
void	testFgesMbComparisonContinuous(int numVars, double edgeFactor, int numCases, int numRuns)	testFgesMbComparisonContinuous.
void	testFgesMbComparisonDiscrete(int numVars, double edgeFactor, int numCases, int numRuns)	testFgesMbComparisonDiscrete.
void	testGFciComparison()	testGFciComparison.
void	testPc(int numVars, double edgeFactor, int numCases, double alpha)	testPc.
void	testPcStable(int numVars, double edgeFactor, int numCases, double alpha)	testPcStable.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

PerformanceTests

public PerformanceTests()

This class represents a set of performance tests for a certain application. It contains various methods to test the performance of different algorithms.

Method Details

endpointMisclassification

public static String endpointMisclassification(List<Node> _nodes,
 Graph estGraph,
 Graph refGraph)

endpointMisclassification.

Parameters:

_nodes - a List object

estGraph - a Graph object

refGraph - a Graph object

Returns:

a String object

main

public static void main(String... args)
                 throws InterruptedException

main.

Parameters:

args - a String object

Throws:

InterruptedException - if any

testPc

public void testPc(int numVars,
 double edgeFactor,
 int numCases,
 double alpha)
            throws InterruptedException

testPc.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

alpha - a double

Throws:

InterruptedException - if any

printStuffForKlea

public void printStuffForKlea()

printStuffForKlea.

testPcStable

public void testPcStable(int numVars,
 double edgeFactor,
 int numCases,
 double alpha)
                  throws InterruptedException

testPcStable.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

alpha - a double

Throws:

InterruptedException - if any

testFges

public void testFges(int numVars,
 double edgeFactor,
 int numCases,
 double penaltyDiscount)

testFges.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

penaltyDiscount - a double

testCpc

public void testCpc(int numVars,
 double edgeFactor,
 int numCases)
             throws InterruptedException

testCpc.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

Throws:

InterruptedException - if any

testCpcStable

public void testCpcStable(int numVars,
 double edgeFactor,
 int numCases,
 double alpha)
                   throws InterruptedException

testCpcStable.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

alpha - a double

Throws:

InterruptedException - if any

testFci

public void testFci(int numVars,
 double edgeFactor,
 int numCases)
             throws InterruptedException

testFci.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

Throws:

InterruptedException - if any

testFgesFci

public void testFgesFci(int numVars,
 double edgeFactor)

testGfci.

Parameters:

numVars - a int

edgeFactor - a double

testFgesComparisonContinuous

public void testFgesComparisonContinuous(int numVars,
 double edgeFactor,
 int numCases,
 int numRuns)

testFgesComparisonContinuous.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

numRuns - a int

testFgesComparisonDiscrete

public void testFgesComparisonDiscrete(int numVars,
 double edgeFactor,
 int numCases,
 int numRuns)

testFgesComparisonDiscrete.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

numRuns - a int

testFgesMbComparisonContinuous

public void testFgesMbComparisonContinuous(int numVars,
 double edgeFactor,
 int numCases,
 int numRuns)

testFgesMbComparisonContinuous.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

numRuns - a int

testFgesMbComparisonDiscrete

public void testFgesMbComparisonDiscrete(int numVars,
 double edgeFactor,
 int numCases,
 int numRuns)

testFgesMbComparisonDiscrete.

Parameters:

numVars - a int

edgeFactor - a double

numCases - a int

numRuns - a int

testGFciComparison

public void testGFciComparison()

testGFciComparison.

testCompareDagToCPDAG

public void testCompareDagToCPDAG(int numLatents)
                           throws InterruptedException

testCompareDagToCPDAG.

Parameters:

numLatents - a int

Throws:

InterruptedException - if any.

testComparePcVersions

public void testComparePcVersions(int numVars,
 double edgeFactor,
 int numLatents)
                           throws InterruptedException

testComparePcVersions.

Parameters:

numVars - a int

edgeFactor - a double

numLatents - a int

Throws:

InterruptedException - if any.

printGraphDegrees

public void printGraphDegrees()

printGraphDegrees.