Uses of Interface
edu.cmu.tetrad.algcomparison.score.ScoreWrapper

Packages that use ScoreWrapper

Package	Description
edu.cmu.tetrad.algcomparison.algorithm
edu.cmu.tetrad.algcomparison.algorithm.continuous.dag
edu.cmu.tetrad.algcomparison.algorithm.multi
edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag
edu.cmu.tetrad.algcomparison.algorithm.oracle.pag
edu.cmu.tetrad.algcomparison.score
edu.cmu.tetrad.algcomparison.utils
edu.cmu.tetrad.search	This package contains classes for causal graph search algorithms.
edu.cmu.tetrad.search.work_in_progress	A package for algorithms that are not ready for prime time.

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm

Methods in edu.cmu.tetrad.algcomparison.algorithm with parameters of type ScoreWrapper

Modifier and Type	Method	Description
static Algorithm	AlgorithmFactory.create(Class<? extends Algorithm> algoClass, IndependenceWrapper test, ScoreWrapper score)	Creates an algorithm.
static Algorithm	AlgorithmFactory.create(Class<? extends Algorithm> algoClass, IndependenceWrapper test, ScoreWrapper score, Graph externalGraph)	Creates an algorithm.
void	MultiDataSetAlgorithm.setScoreWrapper(ScoreWrapper score)	Sets a score wrapper if not null.

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag

Methods in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	DirectLingam.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this DirectLingam instance.
ScoreWrapper	Fask.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this class.
ScoreWrapper	FaskOrig.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this class.

Methods in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	DirectLingam.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for this DirectLingam instance.
void	Fask.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the object.
void	FaskOrig.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the object.

Constructors in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag with parameters of type ScoreWrapper

Modifier	Constructor	Description
	DirectLingam(ScoreWrapper score)	Constructor for DirectLingam.
	Fask(ScoreWrapper score)	Constructs a new Fask object with the given ScoreWrapper.
	FaskOrig(IndependenceWrapper test, ScoreWrapper score)	Constructor for Fask.

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.multi

Methods in edu.cmu.tetrad.algcomparison.algorithm.multi that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	FaskVote.getScoreWrapper()	Returns the score wrapper.
ScoreWrapper	Images.getScoreWrapper()	Retrieves the score wrapper object.
ScoreWrapper	ImagesBoss.getScoreWrapper()	Returns the score wrapper.

Methods in edu.cmu.tetrad.algcomparison.algorithm.multi with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	FaskConcatenated.setScoreWrapper(ScoreWrapper score)	Sets a score wrapper if not null.
void	FaskLofsConcatenated.setScoreWrapper(ScoreWrapper score)	Sets a score wrapper if not null.
void	FaskVote.setScoreWrapper(ScoreWrapper score)	Sets a score wrapper if not null.
void	FciIod.setScoreWrapper(ScoreWrapper score)	Sets a score wrapper if not null.
void	FgesConcatenated.setScoreWrapper(ScoreWrapper score)	Sets a score wrapper if not null.
void	Images.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the algorithm.
void	ImagesBoss.setScoreWrapper(ScoreWrapper score)	Sets a score wrapper if not null.

Constructors in edu.cmu.tetrad.algcomparison.algorithm.multi with parameters of type ScoreWrapper

Modifier	Constructor	Description
	FaskConcatenated(ScoreWrapper score, IndependenceWrapper test)	Constructor for FaskConcatenated.
	FaskVote(IndependenceWrapper test, ScoreWrapper score)	Constructor for FaskVote.
	FaskVote(ScoreWrapper score)	Constructor for FaskVote.
	FgesConcatenated(ScoreWrapper score)	Constructor for FgesConcatenated.
	FgesConcatenated(ScoreWrapper score, boolean compareToTrue)	Constructor for FgesConcatenated.
	FgesConcatenated(ScoreWrapper score, Algorithm externalGraph)	Constructor for FgesConcatenated.
	Images(ScoreWrapper score)	Constructor for Images.
	ImagesBoss(ScoreWrapper score)	Constructor for ImagesBoss.

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	Boss.getScoreWrapper()	Returns the score wrapper.
ScoreWrapper	Cstar.getScoreWrapper()	Returns the score wrapper.
ScoreWrapper	Fges.getScoreWrapper()	Returns the score wrapper.
ScoreWrapper	FgesMb.getScoreWrapper()	Returns the score wrapper.
ScoreWrapper	Grasp.getScoreWrapper()	Returns the score wrapper.
ScoreWrapper	RestrictedBoss.getScoreWrapper()	Returns the score wrapper.
ScoreWrapper	Sp.getScoreWrapper()	Returns the score wrapper.

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	Boss.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper.
void	Cstar.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper.
void	Fges.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper.
void	FgesMb.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper.
void	Grasp.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper.
void	RestrictedBoss.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper.
void	Sp.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper.

Constructors in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag with parameters of type ScoreWrapper

Modifier	Constructor	Description
	Boss(ScoreWrapper score)	Constructs a new BOSS algorithm with the given score.
	Cstar(IndependenceWrapper test, ScoreWrapper score)	Constructor for Cstar.
	Fges(ScoreWrapper score)	Constructor for Fges.
	FgesMb(ScoreWrapper score)	Constructor for FgesMb.
	Grasp(IndependenceWrapper test, ScoreWrapper score)	Constructor for Grasp.
	RestrictedBoss(ScoreWrapper score)	Constructor for RestrictedBoss.
	Sp(ScoreWrapper score)	Constructor for Sp.

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	BossFci.getScoreWrapper()	Retrieves the ScoreWrapper associated with this algorithm.
ScoreWrapper	BossPod.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this method.
ScoreWrapper	DmFcit.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this method.
ScoreWrapper	DmFciT2.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this method.
ScoreWrapper	Fcit.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this method.
ScoreWrapper	FgesFci.getScoreWrapper()	Retrieves the ScoreWrapper associated with this instance.
ScoreWrapper	Gfci.getScoreWrapper()	Retrieves the ScoreWrapper associated with this instance.
ScoreWrapper	GraspFci.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this method.
ScoreWrapper	SpFci.getScoreWrapper()	Retrieves the ScoreWrapper object associated with this algorithm.

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	BossFci.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for this algorithm.
void	BossPod.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the algorithm.
void	DmFcit.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the algorithm.
void	DmFciT2.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the algorithm.
void	Fcit.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the algorithm.
void	FgesFci.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the algorithm.
void	Gfci.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the algorithm.
void	GraspFci.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper for the algorithm.
void	SpFci.setScoreWrapper(ScoreWrapper score)	Sets the ScoreWrapper object for the algorithm.

Constructors in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag with parameters of type ScoreWrapper

Modifier	Constructor	Description
	BossFci(IndependenceWrapper test, ScoreWrapper score)	Constructs a new BOSS-FCI algorithm using the given test and score.
	BossPod(ScoreWrapper score)	FCIT is a class that represents a FCIT algorithm.
	DmFcit(IndependenceWrapper test, ScoreWrapper score)	Represents a DM-FCIT algorithm.
	DmFciT2(IndependenceWrapper test, ScoreWrapper score)	Represents a DM-FCIT algorithm.
	Fcit(IndependenceWrapper test, ScoreWrapper score)	FCIT is a class that represents a FCIT algorithm.
	FgesFci(IndependenceWrapper test, ScoreWrapper score)	Constructs a new instance of FGES-FCI with the given IndependenceWrapper and ScoreWrapper.
	Gfci(IndependenceWrapper test, ScoreWrapper score)	Constructs a new instance of GFCI with the given IndependenceWrapper and ScoreWrapper.
	GraspFci(IndependenceWrapper test, ScoreWrapper score)	Constructor for GraspFci.
	SpFci(IndependenceWrapper test, ScoreWrapper score)	Constructor for the SpFci class.

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.score

Subinterfaces of ScoreWrapper in edu.cmu.tetrad.algcomparison.score

Modifier and Type	Interface	Description
interface	BlockScoreWrapper	Represents an interface for scoring data models using predefined block structures.

Classes in edu.cmu.tetrad.algcomparison.score that implement ScoreWrapper

Modifier and Type	Class	Description
class	BasisFunctionBicScore	Wrapper for Basis Function BIC Score (Basis-BIC) version.
class	BdeuScore	Wrapper for Fisher Z test.
class	BlocksBicScore	Wrapper for Blocks BIC Score (Blocks-BIC) version.
class	ConditionalGaussianBicScore	Wrapper for Fisher Z test.
class	DegenerateGaussianBicScore	Wrapper for degenerate Gaussian BIC score
class	DiscreteBicScore	Wrapper for Discrete BIC test.
class	EbicScore	Wrapper for linear, Gaussian Extended BIC score (Chen and Chen).
class	GicScores	The GicScores class is an implementation of the ScoreWrapper interface that calculates the Generalized Information Criterion (GIC) scores for a given data model.
final class	InstanceAugmentedSemBicScoreWrapper	Wrapper for InstanceAugmentedSemBicScore that: - pulls the testing DataSet from Params.TESTING_DATA (injected by the algorithm wrapper), - takes the instance row from Params.INSTANCE_ROW, - aligns columns by training variable names, - uses alpha from Params.IS_ALPHA (default 1.0).
final class	IsBDeuScoreWrapper	Wrapper for ISBDeuScore (discrete).
class	MagDgBicScore	Wrapper for degenerate Gaussian BIC score
class	MSepScore	Wrapper for Fisher Z test.
class	MVPBicScore	Wrapper for MVP BIC Score.
class	PoissonPriorScore	Wrapper for the Poisson prior score (Bryan)
class	RankBicScore	Wrapper for linear, Gaussian SEM BIC score.
class	SemBicScore	Wrapper for linear, Gaussian SEM BIC score.
class	ZhangShenBoundScore	Wrapper for linear, Gaussian Extended BIC score (Chen and Chen).

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.utils

Methods in edu.cmu.tetrad.algcomparison.utils that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	TakesScoreWrapper.getScoreWrapper()	Returns the score wrapper.

Methods in edu.cmu.tetrad.algcomparison.utils with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	TakesScoreWrapper.setScoreWrapper(ScoreWrapper score)	Sets the score wrapper.

Uses of ScoreWrapper in edu.cmu.tetrad.search

Constructors in edu.cmu.tetrad.search with parameters of type ScoreWrapper

Modifier	Constructor	Description
	Cstar(IndependenceWrapper test, ScoreWrapper score, Parameters parameters)	Constructor.

Uses of ScoreWrapper in edu.cmu.tetrad.search.work_in_progress

Constructors in edu.cmu.tetrad.search.work_in_progress with parameters of type ScoreWrapper

Modifier	Constructor	Description
	FaskVote(List<DataSet> dataSets, ScoreWrapper score, IndependenceWrapper test)	Constructor.