Package edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag

Class Cpc

java.lang.Object

edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag.Cpc

All Implemented Interfaces:

Algorithm, ReturnsBootstrapGraphs, HasKnowledge, HasParameters, TakesIndependenceWrapper, TetradSerializable, Serializable

@Algorithm(name="CPC",
           command="cpc",
           algoType=forbid_latent_common_causes)
@Bootstrapping
public class Cpc
extends Object
implements Algorithm, HasKnowledge, TakesIndependenceWrapper, ReturnsBootstrapGraphs

Conservative PC (CPC).

Version:

$Id: $Id

Author:

josephramsey

See Also:

• Serialized Form

Constructor Summary

Constructors

Constructor	Description
Cpc()	Constructor for Cpc.
Cpc(IndependenceWrapper test)	Constructor for Cpc.

Method Summary

Modifier and Type	Method	Description
List<Graph>	getBootstrapGraphs()	Retrieves the BootstrapGraphs associated with this algorithm.
Graph	getComparisonGraph(Graph graph)	Returns the comparison graph for the given true directed graph.
DataType	getDataType()	Retrieves the data type required by the search algorithm.
String	getDescription()	Returns a short description of the method.
IndependenceWrapper	getIndependenceWrapper()	Retrieves the IndependenceWrapper associated with this algorithm.
Knowledge	getKnowledge()	Retrieves the knowledge associated with the algorithm.
List<String>	getParameters()	Retrieves the list of parameters used in the search algorithm.
Graph	search(DataModel dataModel, Parameters parameters)	Searches for a graph based on the given data model and parameters.
void	setIndependenceWrapper(IndependenceWrapper test)	Sets the independence wrapper for the algorithm.
void	setKnowledge(Knowledge knowledge)	Sets the knowledge associated with the algorithm.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

Cpc

public Cpc()

Constructor for Cpc.

Cpc

public Cpc(IndependenceWrapper test)

Constructor for Cpc.

Parameters:

test - a IndependenceWrapper object

Method Details

search

public Graph search(DataModel dataModel,
 Parameters parameters)

Searches for a graph based on the given data model and parameters.

Specified by:

search in interface Algorithm

Parameters:

dataModel - The data set to run the search on.

parameters - The parameters of the search.

Returns:

The resulting graph.

getComparisonGraph

public Graph getComparisonGraph(Graph graph)

Returns the comparison graph for the given true directed graph.

Specified by:

getComparisonGraph in interface Algorithm

Parameters:

graph - The true directed graph, if there is one.

Returns:

The comparison graph.

getDescription

public String getDescription()

Returns a short description of the method.

Specified by:

getDescription in interface Algorithm

Returns:

The description of the method.

getDataType

public DataType getDataType()

Retrieves the data type required by the search algorithm.

Specified by:

getDataType in interface Algorithm

Returns:

The data type required by the search algorithm.

getParameters

public List<String> getParameters()

Retrieves the list of parameters used in the search algorithm.

Specified by:

getParameters in interface Algorithm

Specified by:

getParameters in interface HasParameters

Returns:

The list of parameters used in the search algorithm.

getKnowledge

public Knowledge getKnowledge()

Retrieves the knowledge associated with the algorithm.

Specified by:

getKnowledge in interface HasKnowledge

Returns:

The knowledge object.

setKnowledge

public void setKnowledge(Knowledge knowledge)

Sets the knowledge associated with the algorithm.

Specified by:

setKnowledge in interface HasKnowledge

Parameters:

knowledge - a knowledge object.

getIndependenceWrapper

public IndependenceWrapper getIndependenceWrapper()

Retrieves the IndependenceWrapper associated with this algorithm.

Specified by:

getIndependenceWrapper in interface TakesIndependenceWrapper

Returns:

The IndependenceWrapper object.

setIndependenceWrapper

public void setIndependenceWrapper(IndependenceWrapper test)

Sets the independence wrapper for the algorithm.

Specified by:

setIndependenceWrapper in interface TakesIndependenceWrapper

Parameters:

test - the independence wrapper.

getBootstrapGraphs

public List<Graph> getBootstrapGraphs()

Retrieves the BootstrapGraphs associated with this algorithm.

Specified by:

getBootstrapGraphs in interface ReturnsBootstrapGraphs

Returns:

The list of BootstrapGraphs.