Package edu.pitt.dbmi.algo.bayesian.constraint.search

Class RfciBsc

java.lang.Object
edu.pitt.dbmi.algo.bayesian.constraint.search.RfciBsc
All Implemented Interfaces:
IGraphSearch
public class RfciBsc extends Object implements IGraphSearch
Dec 17, 2018 3:28:15 PM
Author:
Chirayu Kong Wongchokprasitti, PhD (chw20@pitt.edu)

  • Constructor Details

    • RfciBsc

      public RfciBsc(Rfci rfci)

  • Method Details

    • search

      public Graph search()
      Description copied from interface: IGraphSearch
      Runs the search and returns a graph.
      Specified by:
      search in interface IGraphSearch
      Returns:
      The discovered graph.

    • setNumRandomizedSearchModels

      public void setNumRandomizedSearchModels(int numRandomizedSearchModels)

    • setNumBscBootstrapSamples

      public void setNumBscBootstrapSamples(int numBscBootstrapSamples)

    • setLowerBound

      public void setLowerBound(double lowerBound)

    • setUpperBound

      public void setUpperBound(double upperBound)

    • setOutputRBD

      public void setOutputRBD(boolean outputRBD)

    • getGraphRBD

      public Graph getGraphRBD()

    • getGraphRBI

      public Graph getGraphRBI()

    • getBscD

      public double getBscD()

    • getBscI

      public double getBscI()

    • setVerbose

      public void setVerbose(boolean verbose)
      Sets whether verbose output should be produced.

    • getOut

      public PrintStream getOut()
      Returns:
      the output stream that output (except for log output) should be sent to.

    • setOut

      public void setOut(PrintStream out)
      Sets the output stream that output (except for log output) should be sent to. By detault System.out.

    • setThresholdNoRandomDataSearch

      public void setThresholdNoRandomDataSearch(boolean thresholdNoRandomDataSearch)

    • setCutoffDataSearch

      public void setCutoffDataSearch(double cutoffDataSearch)

    • setThresholdNoRandomConstrainSearch

      public void setThresholdNoRandomConstrainSearch(boolean thresholdNoRandomConstrainSearch)

    • setCutoffConstrainSearch

      public void setCutoffConstrainSearch(double cutoffConstrainSearch)