Uses of Interface
edu.cmu.tetrad.algcomparison.score.ScoreWrapper

Packages that use ScoreWrapper

Package	Description
edu.cmu.tetrad.algcomparison.algorithm
edu.cmu.tetrad.algcomparison.algorithm.continuous.dag
edu.cmu.tetrad.algcomparison.algorithm.multi
edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag
edu.cmu.tetrad.algcomparison.algorithm.oracle.pag
edu.cmu.tetrad.algcomparison.algorithm.oracle.pattern
edu.cmu.tetrad.algcomparison.score
edu.cmu.tetrad.algcomparison.utils
edu.cmu.tetrad.search	Contains classes for searching for (mostly structural) causal models given data.
edu.cmu.tetrad.search.work_in_progress	Contains some classes that aren't ready for prime time.
edu.pitt.dbmi.algo.resampling
edu.pitt.dbmi.algo.resampling.task

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm

Methods in edu.cmu.tetrad.algcomparison.algorithm with parameters of type ScoreWrapper

Modifier and Type	Method	Description
static Algorithm	AlgorithmFactory.create(Class<? extends Algorithm> algoClass, IndependenceWrapper test, ScoreWrapper score)	Creates an algorithm.
static Algorithm	AlgorithmFactory.create(Class<? extends Algorithm> algoClass, IndependenceWrapper test, ScoreWrapper score, Graph externalGraph)	Creates an algorithm.
void	MultiDataSetAlgorithm.setScoreWrapper(ScoreWrapper score)	Sets a score wrapper if not null.

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag

Methods in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	DirectLingam.getScoreWrapper()

Methods in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	DirectLingam.setScoreWrapper(ScoreWrapper score)

Constructors in edu.cmu.tetrad.algcomparison.algorithm.continuous.dag with parameters of type ScoreWrapper

Modifier	Constructor	Description
	DirectLingam(ScoreWrapper score)

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.multi

Methods in edu.cmu.tetrad.algcomparison.algorithm.multi that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	Fask.getScoreWrapper()
ScoreWrapper	FaskVote.getScoreWrapper()
ScoreWrapper	Images.getScoreWrapper()

Methods in edu.cmu.tetrad.algcomparison.algorithm.multi with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	Fask.setScoreWrapper(ScoreWrapper score)
void	FaskConcatenated.setScoreWrapper(ScoreWrapper score)
void	FaskLofsConcatenated.setScoreWrapper(ScoreWrapper score)
void	FaskVote.setScoreWrapper(ScoreWrapper score)
void	FciIod.setScoreWrapper(ScoreWrapper score)
void	FgesConcatenated.setScoreWrapper(ScoreWrapper score)
void	Images.setScoreWrapper(ScoreWrapper score)

Constructors in edu.cmu.tetrad.algcomparison.algorithm.multi with parameters of type ScoreWrapper

Modifier	Constructor	Description
	Fask(IndependenceWrapper test, ScoreWrapper score)
	FaskConcatenated(ScoreWrapper score, IndependenceWrapper test)
	FaskVote(IndependenceWrapper test, ScoreWrapper score)
	FaskVote(ScoreWrapper score)
	FgesConcatenated(ScoreWrapper score)
	FgesConcatenated(ScoreWrapper score, boolean compareToTrue)
	FgesConcatenated(ScoreWrapper score, Algorithm externalGraph)
	Images(ScoreWrapper score)

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	Boss.getScoreWrapper()
ScoreWrapper	Fges.getScoreWrapper()
ScoreWrapper	FgesMb.getScoreWrapper()
ScoreWrapper	Grasp.getScoreWrapper()
ScoreWrapper	PcLingam.getScoreWrapper()
ScoreWrapper	RestrictedBoss.getScoreWrapper()
ScoreWrapper	Sp.getScoreWrapper()

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	Boss.setScoreWrapper(ScoreWrapper score)
void	Fges.setScoreWrapper(ScoreWrapper score)
void	FgesMb.setScoreWrapper(ScoreWrapper score)
void	Grasp.setScoreWrapper(ScoreWrapper score)
void	PcLingam.setScoreWrapper(ScoreWrapper score)
void	RestrictedBoss.setScoreWrapper(ScoreWrapper score)
void	Sp.setScoreWrapper(ScoreWrapper score)

Constructors in edu.cmu.tetrad.algcomparison.algorithm.oracle.cpdag with parameters of type ScoreWrapper

Modifier	Constructor	Description
	Boss(ScoreWrapper score)
	Fges(ScoreWrapper score)
	FgesMb(ScoreWrapper score)
	FgesMeasurement(ScoreWrapper score)
	Grasp(IndependenceWrapper test, ScoreWrapper score)
	PcLingam(ScoreWrapper scoreWrapper)
	RestrictedBoss(ScoreWrapper score)
	Sp(ScoreWrapper score)

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	Bfci.getScoreWrapper()
ScoreWrapper	Gfci.getScoreWrapper()
ScoreWrapper	GraspFci.getScoreWrapper()
ScoreWrapper	SpFci.getScoreWrapper()
ScoreWrapper	SvarGfci.getScoreWrapper()

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	Bfci.setScoreWrapper(ScoreWrapper score)
void	Gfci.setScoreWrapper(ScoreWrapper score)
void	GraspFci.setScoreWrapper(ScoreWrapper score)
void	SpFci.setScoreWrapper(ScoreWrapper score)
void	SvarGfci.setScoreWrapper(ScoreWrapper score)

Constructors in edu.cmu.tetrad.algcomparison.algorithm.oracle.pag with parameters of type ScoreWrapper

Modifier	Constructor	Description
	Bfci(IndependenceWrapper test, ScoreWrapper score)
	Gfci(IndependenceWrapper test, ScoreWrapper score)
	GraspFci(IndependenceWrapper test, ScoreWrapper score)
	SpFci(IndependenceWrapper test, ScoreWrapper score)
	SvarGfci(IndependenceWrapper type, ScoreWrapper score)

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.algorithm.oracle.pattern

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.pattern that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	Cstar.getScoreWrapper()

Methods in edu.cmu.tetrad.algcomparison.algorithm.oracle.pattern with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	Cstar.setScoreWrapper(ScoreWrapper score)

Constructors in edu.cmu.tetrad.algcomparison.algorithm.oracle.pattern with parameters of type ScoreWrapper

Modifier	Constructor	Description
	Cstar(IndependenceWrapper test, ScoreWrapper score)

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.score

Classes in edu.cmu.tetrad.algcomparison.score that implement ScoreWrapper

Modifier and Type	Class	Description
class	BdeuScore	Wrapper for Fisher Z test.
class	CciScore
class	ConditionalGaussianBicScore	Wrapper for Fisher Z test.
class	DegenerateGaussianBicScore	Wrapper for degenerate Gaussian BIC score
class	DiscreteBicScore	Wrapper for Discrete BIC test.
class	EbicScore	Wrapper for linear, Gaussian Extended BIC score (Chen and Chen).
class	FisherZScore	Wrapper for Fisher Z test.
class	GicScores	Wrapper for linear, Gaussian Extended BIC score (Chen and Chen).
class	MagSemBicScore	Wrapper for linear, Gaussian SEM BIC score.
class	MSeparationScore	Wrapper for Fisher Z test.
class	MVPBicScore	Wrapper for MVP BIC Score.
class	PoissonPriorScore	Wrapper for the Poisson prior score (Bryan)
class	PositiveCorrScore	Wrapper for Fisher Z test.
class	SemBicScore	Wrapper for linear, Gaussian SEM BIC score.
class	SemBicScoreDeterministic	Wrapper for Fisher Z test.
class	ZhangShenBoundScore	Wrapper for linear, Gaussian Extended BIC score (Chen and Chen).

Uses of ScoreWrapper in edu.cmu.tetrad.algcomparison.utils

Methods in edu.cmu.tetrad.algcomparison.utils that return ScoreWrapper

Modifier and Type	Method	Description
ScoreWrapper	UsesScoreWrapper.getScoreWrapper()

Methods in edu.cmu.tetrad.algcomparison.utils with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	UsesScoreWrapper.setScoreWrapper(ScoreWrapper score)

Uses of ScoreWrapper in edu.cmu.tetrad.search

Constructors in edu.cmu.tetrad.search with parameters of type ScoreWrapper

Modifier	Constructor	Description
	Cstar(IndependenceWrapper test, ScoreWrapper score, Parameters parameters)	Constructor.

Uses of ScoreWrapper in edu.cmu.tetrad.search.work_in_progress

Constructors in edu.cmu.tetrad.search.work_in_progress with parameters of type ScoreWrapper

Modifier	Constructor	Description
	FaskVote(List<DataSet> dataSets, ScoreWrapper score, IndependenceWrapper test)	Constructor.

Uses of ScoreWrapper in edu.pitt.dbmi.algo.resampling

Methods in edu.pitt.dbmi.algo.resampling with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	GeneralResamplingSearch.setScoreWrapper(ScoreWrapper scoreWrapper)
void	GeneralResamplingTest.setScoreWrapper(ScoreWrapper scoreWrapper)

Uses of ScoreWrapper in edu.pitt.dbmi.algo.resampling.task

Methods in edu.pitt.dbmi.algo.resampling.task with parameters of type ScoreWrapper

Modifier and Type	Method	Description
void	GeneralResamplingSearchRunnable.setScoreWrapper(ScoreWrapper scoreWrapper)