Package edu.pitt.dbmi.algo.resampling

Class GeneralResamplingSearch

java.lang.Object
edu.pitt.dbmi.algo.resampling.GeneralResamplingSearch
public class GeneralResamplingSearch extends Object
Sep 7, 2018 1:38:50 PM
Author:
Chirayu Kong Wongchokprasitti, PhD (chw20@pitt.edu)

  • Constructor Details

    • GeneralResamplingSearch

      public GeneralResamplingSearch(DataSet data, int numberResampling)

    • GeneralResamplingSearch

      public GeneralResamplingSearch(List<DataSet> dataSets, int numberResampling)

  • Method Details

    • setAlgorithm

      public void setAlgorithm(Algorithm algorithm)

    • setMultiDataSetAlgorithm

      public void setMultiDataSetAlgorithm(MultiDataSetAlgorithm multiDataSetAlgorithm)

    • setPercentResampleSize

      public void setPercentResampleSize(double percentResampleSize)

    • setResamplingWithReplacement

      public void setResamplingWithReplacement(boolean resamplingWithReplacement)

    • setRunParallel

      public void setRunParallel(boolean runParallel)

    • setAddOriginalDataset

      public void setAddOriginalDataset(boolean addOriginalDataset)

    • setVerbose

      public void setVerbose(boolean verbose)

    • setData

      public void setData(DataSet data)

    • setKnowledge

      public void setKnowledge(Knowledge knowledge)
      Sets the background knowledge.
      Parameters:
      knowledge - the knowledge object, specifying forbidden and required edges.

    • setExternalGraph

      public void setExternalGraph(Graph externalGraph)

    • getOut

      public PrintStream getOut()
      Returns:
      the output stream that output (except for log output) should be sent to.

    • setOut

      public void setOut(PrintStream out)
      Sets the output stream that output (except for log output) should be sent to. By default System.out.

    • setParameters

      public void setParameters(Parameters parameters)

    • search

      public List<Graph> search()

    • getNumNograph

      public int getNumNograph()

    • setScoreWrapper

      public void setScoreWrapper(ScoreWrapper scoreWrapper)