Package edu.cmu.tetrad.search

Class BossOrig

java.lang.Object

edu.cmu.tetrad.search.BossOrig

public class BossOrig
extends Object

Implements the BOSS algorithm.

Author:

bryanandrews, josephramsey

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static enum	BossOrig.AlgType

Constructor Summary

Constructors

Constructor	Description
BossOrig(@NotNull IndependenceTest test, Score score)
BossOrig(Score score)
BossOrig(TeyssierScorer scorer)

Method Summary

Modifier and Type	Method	Description
void	besMutation(TeyssierScorer scorer)
List<Node>	bestOrder(@NotNull List<Node> order)
void	betterMutation1(@NotNull TeyssierScorer scorer)
void	betterMutation2(@NotNull TeyssierScorer scorer)
void	betterMutationBryan(@NotNull TeyssierScorer scorer)
Graph	getGraph(boolean cpDag)
int	getNumEdges()
List<Node>	getVariables()
boolean	isVerbose()
void	orientbk(Knowledge bk, Graph graph, List<Node> variables)
void	setAlgType(BossOrig.AlgType algType)
void	setDepth(int depth)
void	setKnowledge(Knowledge knowledge)
void	setNumStarts(int numStarts)
void	setUseDataOrder(boolean useDataOrder)
void	setUseRaskuttiUhler(boolean useRaskuttiUhler)
void	setUseScore(boolean useScore)
void	setVerbose(boolean verbose)
void	tubes(@NotNull TeyssierScorer scorer)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

BossOrig

public BossOrig(@NotNull
 @NotNull IndependenceTest test,
 Score score)

BossOrig

public BossOrig(Score score)

BossOrig

public BossOrig(TeyssierScorer scorer)

Method Details

bestOrder

public List<Node> bestOrder(@NotNull
 @NotNull List<Node> order)

betterMutation1

public void betterMutation1(@NotNull
 @NotNull TeyssierScorer scorer)

betterMutation2

public void betterMutation2(@NotNull
 @NotNull TeyssierScorer scorer)

betterMutationBryan

public void betterMutationBryan(@NotNull
 @NotNull TeyssierScorer scorer)

tubes

public void tubes(@NotNull
 @NotNull TeyssierScorer scorer)

besMutation

public void besMutation(TeyssierScorer scorer)

getNumEdges

public int getNumEdges()

getGraph

public Graph getGraph(boolean cpDag)

orientbk

public void orientbk(Knowledge bk,
 Graph graph,
 List<Node> variables)

setNumStarts

public void setNumStarts(int numStarts)

getVariables

public List<Node> getVariables()

isVerbose

public boolean isVerbose()

setVerbose

public void setVerbose(boolean verbose)

setKnowledge

public void setKnowledge(Knowledge knowledge)

setDepth

public void setDepth(int depth)

setUseScore

public void setUseScore(boolean useScore)

setUseRaskuttiUhler

public void setUseRaskuttiUhler(boolean useRaskuttiUhler)

setUseDataOrder

public void setUseDataOrder(boolean useDataOrder)

setAlgType

public void setAlgType(BossOrig.AlgType algType)