Package edu.cmu.tetrad.search

Class FindOneFactorClusters

java.lang.Object

edu.cmu.tetrad.search.FindOneFactorClusters

public class FindOneFactorClusters
extends Object

Implements FindOneFactorCluster by Erich Kummerfeld (adaptation of a two factor quartet algorithm to a one factor tetrad algorithm).

Author:

Joseph Ramsey

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static enum	FindOneFactorClusters.Algorithm

Constructor Summary

Constructors

Constructor	Description
FindOneFactorClusters(DataSet dataSet, TestType testType, FindOneFactorClusters.Algorithm algorithm, double alpha)
FindOneFactorClusters(ICovarianceMatrix cov, TestType testType, FindOneFactorClusters.Algorithm algorithm, double alpha)

Method Summary

Modifier and Type	Method	Description
List<List<Node>>	getClusters()	The clusters output by the algorithm from the last call to search().
Graph	search()
void	setCheckType(ClusterSignificance.CheckType checkType)
void	setSignificanceChecked(boolean significanceChecked)
void	setVerbose(boolean verbose)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

FindOneFactorClusters

public FindOneFactorClusters(ICovarianceMatrix cov,
 TestType testType,
 FindOneFactorClusters.Algorithm algorithm,
 double alpha)

FindOneFactorClusters

public FindOneFactorClusters(DataSet dataSet,
 TestType testType,
 FindOneFactorClusters.Algorithm algorithm,
 double alpha)

Method Details

search

public Graph search()

getClusters

public List<List<Node>> getClusters()

The clusters output by the algorithm from the last call to search().

setVerbose

public void setVerbose(boolean verbose)

setSignificanceChecked

public void setSignificanceChecked(boolean significanceChecked)

setCheckType

public void setCheckType(ClusterSignificance.CheckType checkType)