Tetrad is a program which creates, simulates data from, estimates, tests, predicts with, and searches for causal and statistical models. The aim of the program is to provide sophisticated methods in a friendly interface requiring very little statistical sophistication of the user and no programming knowledge. It is not intended to replace flexible statistical programming systems such as Matlab, Splus or R. Tetrad is freeware that performs many of the functions in commercial programs such as Netica, Hugin, LISREL, EQS and other programs, and many discovery functions these commercial programs do not perform.
Tetrad is unique in the suite of principled search ("exploration," "discovery") algorithms it provides--for example its ability to search when there may be unobserved confounders of measured variables, to search for models of latent structure, and to search for linear feedback models--and in the ability to calculate predictions of the effects of interventions or experiments based on a model. All of its search procedures are "pointwise consistent"--they are guaranteed to converge almost certainly to correct information about the true structure in the large sample limit, provided that structure and the sample data satisfy various commonly made (but not always true!) assumptions.
Tetrad is limited to models of categorical data (which can also be used for ordinal data) and to linear models ("structural equation models') with a Normal probability distribution, and to a very limited class of time series models. The Tetrad programs describe causal models in three distinct parts or stages: a picture, representing a directed graph specifying hypothetical causal relations among the variables; a specification of the family of probability distributions and kinds of parameters associated with the graphical model; and a specification of the numerical values of those parameters.
The program and its search algorithms have been developed over several years with support from the National Aeronautics and Space Administration and the Office of Naval Research. Joseph Ramsey has implemented most of the program, with substantial assistance from Frank Wimberly.
The Tetrad codebase is publically available on GitHub. The programmer's website can be found here.
The program is realeased under the GNU GPL v. 2 license and may be freely downloaded and used without permission of copyright holders, who reserve the right to alter the program at any time without notification. Executable and Source code for all versions of Tetrad V, and this manual, are copyrighted, 2015, by Clark Glymour, Richard Scheines, Peter Spirtes and Joseph Ramsey.